Factsheet for AT3G55120.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40202	Canola	plastid	81.3	79.37
Bra007142.1-P	Field mustard	plastid	80.89	79.28
CDX73402	Canola	plastid	80.89	79.28
Bra003209.1-P	Field mustard	plastid	68.7	74.45
CDY65002	Canola	plastid	68.7	74.45
CDY53696	Canola	plastid	59.35	73.37
Bra017728.1-P	Field mustard	plastid	56.1	70.05
CDX72554	Canola	plastid	65.85	69.23
CDY47033	Canola	plastid	53.25	68.23
VIT_13s0067g03820.t01	Wine grape	extracellular	60.98	64.1
AT5G66220.1	Thale cress	cytosol	43.09	60.92
KRG92978	Soybean	plastid	56.1	60.53
Solyc05g010310.2.1	Tomato	cytosol	54.06	59.91
Solyc05g010320.2.1	Tomato	cytosol	53.66	58.41
Zm00001d034635_P001	Maize	cytosol, extracellular	54.06	57.58
EER90629	Sorghum	cytosol	53.25	56.71
Zm00001d012972_P001	Maize	cytosol	51.22	54.55
TraesCS5A01G475600.1	Wheat	golgi, plastid	50.41	54.15
CDX73401	Canola	plastid	65.45	52.96
HORVU5Hr1G112670.1	Barley	cytosol	49.59	52.81
Os03t0819600-01	Rice	cytosol, plasma membrane	50.0	52.79
TraesCS5B01G488900.1	Wheat	golgi	49.19	52.38
GSMUA_Achr4P16830_001	Banana	cytosol	50.0	52.12
TraesCS5D01G489000.1	Wheat	cytosol	48.78	51.95
Bra007145.1-P	Field mustard	plastid	61.79	50.84
CDY40203	Canola	plastid	55.69	49.82
TraesCS7B01G038200.1	Wheat	cytosol	41.87	45.98
AT5G05270.1	Thale cress	cytosol	23.17	27.27

Protein Annotations

KEGG:00941+5.5.1.6	Gene3D:1.10.890.20	Gene3D:3.50.70.10	PDB:4DOI	EntrezGene:824678	MapMan:9.2.2.2.1
ProteinID:AAA32766.1	ProteinID:AAL35225.1	ProteinID:AEE79342.1	EMBL:AJ418046	ArrayExpress:AT3G55120	EnsemblPlantsGene:AT3G55120
RefSeq:AT3G55120	TAIR:AT3G55120	RefSeq:AT3G55120-TAIR-G	EnsemblPlants:AT3G55120.1	TAIR:AT3G55120.1	EMBL:AY086088
EMBL:BT004265	EMBL:BT005528	ProteinID:CAB82707.2	ProteinID:CAB94969.1	ProteinID:CAB94970.1	ProteinID:CAB94971.1
ProteinID:CAB94972.1	ProteinID:CAB94973.1	ProteinID:CAB94974.1	ProteinID:CAB94975.1	ProteinID:CAB94976.1	ProteinID:CAB94977.1
ProteinID:CAB94978.1	ProteinID:CAB94979.1	ProteinID:CAB94980.1	ProteinID:CAB94981.1	ProteinID:CAB94982.1	ProteinID:CAB94983.1
ProteinID:CAB94984.1	ProteinID:CAB94985.1	ProteinID:CAB94986.1	ProteinID:CAB94987.1	ProteinID:CAB94988.1	ProteinID:CAB94989.1
ProteinID:CAB94990.1	ProteinID:CAB94991.1	ProteinID:CAD42187.1	ProteinID:CAD42188.1	ProteinID:CAD42189.1	ProteinID:CAD42190.1
ProteinID:CAD42191.1	ProteinID:CAD42192.1	ProteinID:CAD42193.1	ProteinID:CAD42194.1	ProteinID:CAD42195.1	ProteinID:CAD42196.1
ProteinID:CAD42197.1	ProteinID:CAD42198.1	ProteinID:CAD42199.1	ProteinID:CAD42200.1	ProteinID:CAD42201.1	ProteinID:CAD42202.1
ProteinID:CAD42203.1	ProteinID:CAD42204.1	ProteinID:CAD42205.1	ProteinID:CAD42206.1	ProteinID:CAD42207.1	ProteinID:CAD42208.1
ProteinID:CAD42209.1	ProteinID:CAD42210.1	ProteinID:CAD42211.1	ProteinID:CAD42212.1	ProteinID:CAD42213.1	ProteinID:CAD42214.1
ProteinID:CAD42215.1	ProteinID:CAD42216.1	ProteinID:CAD42217.1	ProteinID:CAD42218.1	ProteinID:CAD42219.1	ProteinID:CAD42220.1
ProteinID:CAD42221.1	ProteinID:CAD42222.1	ProteinID:CAD42223.1	ProteinID:CAD42224.1	ProteinID:CAD42225.1	ProteinID:CAD42226.1
ProteinID:CAD42227.1	ProteinID:CAD42228.1	ProteinID:CAD42229.1	InterPro:Chalcone_isomerase	InterPro:Chalcone_isomerase_3-sand	InterPro:Chalcone_isomerase_bundle_sf
InterPro:Chalcone_isomerase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009411	GO:GO:0009628	GO:GO:0009705
GO:GO:0009719	GO:GO:0009733	GO:GO:0009813	GO:GO:0010224	GO:GO:0016020	GO:GO:0016853
GO:GO:0016872	GO:GO:0042406	GO:GO:0045430	GO:GO:0080167	InterPro:IPR016088	InterPro:IPR016089
RefSeq:NP_191072.1	UniProt:P41088	PFAM:PF02431	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001170
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR28039
PANTHER:PTHR28039:SF8	SUPFAM:SSF54626	Symbol:TT5	UniParc:UPI000000C30C	:	:

Description

CHI1Chalcone--flavonone isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P41088]

Coordinates

chr3:-:20430059..20431597

Molecular Weight (calculated)

26597.0 Da

IEP (calculated)

5.190

GRAVY (calculated)

0.002

Length

246 amino acids

Sequence
(BLAST)

001: MSSSNACASP SPFPAVTKLH VDSVTFVPSV KSPASSNPLF LGGAGVRGLD IQGKFVIFTV IGVYLEGNAV PSLSVKWKGK TTEELTESIP FFREIVTGAF
101: EKFIKVTMKL PLTGQQYSEK VTENCVAIWK QLGLYTDCEA KAVEKFLEIF KEETFPPGSS ILFALSPTGS LTVAFSKDDS IPETGIAVIE NKLLAEAVLE
201: SIIGKNGVSP GTRLSVAERL SQLMMKNKDE KEVSDHSVEE KLAKEN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.