Factsheet for AT5G05270.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009101.1-P	Field mustard	cytosol	90.91	92.68
CDX70163	Canola	cytosol	90.91	92.68
CDX98830	Canola	cytosol	89.0	90.73
Solyc05g052240.2.1	Tomato	cytosol	59.33	64.25
PGSC0003DMT400030430	Potato	cytoskeleton, cytosol, peroxisome	63.16	62.86
KRH53728	Soybean	endoplasmic reticulum, nucleus	61.72	61.72
Os11t0116300-01	Rice	cytosol, plasma membrane	61.72	60.85
Os12t0115700-01	Rice	cytosol	61.24	60.38
KRH64204	Soybean	nucleus	60.29	60.29
VIT_13s0067g02870.t01	Wine grape	extracellular	68.9	58.3
TraesCS5D01G145400.1	Wheat	cytosol, golgi	60.29	58.06
TraesCS5B01G145800.1	Wheat	cytosol, golgi	60.29	58.06
TraesCS5A01G146900.1	Wheat	cytosol	59.33	57.14
KXG22932	Sorghum	cytosol	56.46	53.15
Zm00001d044683_P001	Maize	cytosol, extracellular	57.42	50.21
HORVU5Hr1G046480.1	Barley	cytosol, golgi, mitochondrion, plastid	57.89	46.18
GSMUA_Achr11P...	Banana	cytosol	62.68	45.64
AT5G66220.1	Thale cress	cytosol	19.62	23.56
AT3G55120.1	Thale cress	plastid	27.27	23.17

Protein Annotations

KEGG:00941+5.5.1.6	Gene3D:1.10.890.20	Gene3D:3.50.70.10	MapMan:35.1	PDB:4DOK	EntrezGene:830409
ProteinID:AED90848.1	ProteinID:AED90849.1	ArrayExpress:AT5G05270	EnsemblPlantsGene:AT5G05270	RefSeq:AT5G05270	TAIR:AT5G05270
RefSeq:AT5G05270-TAIR-G	EnsemblPlants:AT5G05270.1	TAIR:AT5G05270.1	EMBL:AY063786	EMBL:AY088019	EMBL:AY096448
ProteinID:BAB09970.1	InterPro:Chalcone_isomerase	InterPro:Chalcone_isomerase_3-sand	InterPro:Chalcone_isomerase_bundle_sf	InterPro:Chalcone_isomerase_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009813
GO:GO:0016853	GO:GO:0016872	GO:GO:0045430	GO:GO:0080167	InterPro:IPR016088	InterPro:IPR016089
RefSeq:NP_568154.1	RefSeq:NP_850770.1	PFAM:PF02431	PO:PO:0000013	PO:PO:0000037	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001170	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009001	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PANTHER:PTHR28039	PANTHER:PTHR28039:SF4	UniProt:Q8VZW3	SUPFAM:SSF54626	UniParc:UPI000009DDEC
SEG:seg	:	:	:	:	:

Description

CHI3Probable chalcone--flavonone isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZW3]

Coordinates

chr5:+:1563286..1565324

Molecular Weight (calculated)

23332.8 Da

IEP (calculated)

4.458

GRAVY (calculated)

-0.203

Length

209 amino acids

Sequence
(BLAST)

001: MGTEMVMVHE VPFPPQIITS KPLSLLGQGI TDIEIHFLQV KFTAIGVYLD PSDVKTHLDN WKGKTGKELA GDDDFFDALA SAEMEKVIRV VVIKEIKGAQ
101: YGVQLENTVR DRLAEEDKYE EEEETELEKV VGFFQSKYFK ANSVITYHFS AKDGICEIGF ETEGKEEEKL KVENANVVGM MQRWYLSGSR GVSPSTIVSI
201: ADSISAVLT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.