CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0116300-01	Rice	cytosol, plasma membrane	71.62	75.0
Zm00001d044683_P001	Maize	cytosol, extracellular	79.28	73.64
Os12t0115700-01	Rice	cytosol	70.27	73.58
TraesCS5A01G146900.1	Wheat	cytosol	64.86	66.36
TraesCS5B01G145800.1	Wheat	cytosol, golgi	64.86	66.36
TraesCS5D01G145400.1	Wheat	cytosol, golgi	64.41	65.9
Solyc05g052240.2.1	Tomato	cytosol	52.25	60.1
CDX70163	Canola	cytosol	54.5	59.02
Bra009101.1-P	Field mustard	cytosol	54.5	59.02
CDX98830	Canola	cytosol	54.05	58.54
PGSC0003DMT400030430	Potato	cytoskeleton, cytosol, peroxisome	54.95	58.1
AT5G05270.1	Thale cress	cytosol	53.15	56.46
KRH53728	Soybean	endoplasmic reticulum, nucleus	50.9	54.07
HORVU5Hr1G046480.1	Barley	cytosol, golgi, mitochondrion, plastid	63.06	53.44
KRH64204	Soybean	nucleus	49.55	52.63
VIT_13s0067g02870.t01	Wine grape	extracellular	58.11	52.23
GSMUA_Achr11P...	Banana	cytosol	59.91	46.34
EER90629	Sorghum	cytosol	31.08	29.87

Protein Annotations

KEGG:00941+5.5.1.6	Gene3D:1.10.890.20	Gene3D:3.50.70.10	MapMan:35.1	UniProt:A0A1B6PB28	InterPro:Chalcone_isomerase
InterPro:Chalcone_isomerase_3-sand	InterPro:Chalcone_isomerase_bundle_sf	InterPro:Chalcone_isomerase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009813	GO:GO:0016872	GO:GO:0045430
GO:GO:0080167	InterPro:IPR016088	InterPro:IPR016089	EnsemblPlants:KXG22932	ProteinID:KXG22932	ProteinID:KXG22932.1
PFAM:PF02431	PANTHER:PTHR28039	PANTHER:PTHR28039:SF4	MetaCyc:PWY-2002	MetaCyc:PWY-5059	MetaCyc:PWY-6325
MetaCyc:PWY-6787	MetaCyc:PWY-7397	EnsemblPlantsGene:SORBI_3008G030100	SUPFAM:SSF54626	UniParc:UPI0001C80784	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:2683413..2684170

Molecular Weight (calculated)

24017.5 Da

IEP (calculated)

4.479

GRAVY (calculated)

0.097

Length

222 amino acids

Sequence
(BLAST)

001: MLISAVGSET KTITFEGIPF PAEITAAGNP LSLLATGITD IEIHFLQIKY NAIGVYLHSN DDSDLLTTHL GAWKGKTAED LLADAAFWSA LVSSPVEKLL
101: RVVVIKEIKG SQYGVQLESS VRDRLAAVDL YEDDEEEALE KVAEFFQAKY FKPGSVITFH FPATPGPADI TFVTEGKADA KITVENEHVA GMIQKWYLGG
201: DNAVSPTTVR SLADRFAALL AA

Best Arabidopsis Sequence Match ( AT5G05270.2 )
(BLAST)

001: MGTEMVMVHE VPFPPQIITS KPLSLLGQGI TDIEIHFLQV KFTAIGVYLD PSDVKTHLDN WKGKTGKELA GDDDFFDALA SAEMEKVIRV VVIKEIKGAQ
101: YGVQLENTVR DRLAEEDKYE EEEETELEKV VGFFQSKYFK ANSVITYHFS AKDGICEIGF ETEGKEEEKL KVENANVVGM MQRWYLSGSR GVSPSTIVSI
201: ADSISAVLT

Arabidopsis Description

CHI3Probable chalcone--flavonone isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.