Factsheet for Os12t0115700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0116300-01	Rice	cytosol, plasma membrane	95.75	95.75
KXG22932	Sorghum	cytosol	73.58	70.27
TraesCS5D01G145400.1	Wheat	cytosol, golgi	71.7	70.05
TraesCS5A01G146900.1	Wheat	cytosol	71.23	69.59
TraesCS5B01G145800.1	Wheat	cytosol, golgi	70.75	69.12
Zm00001d044683_P001	Maize	cytosol, extracellular	72.64	64.44
Solyc05g052240.2.1	Tomato	cytosol	56.6	62.18
Bra009101.1-P	Field mustard	cytosol	59.91	61.95
CDX70163	Canola	cytosol	59.91	61.95
AT5G05270.1	Thale cress	cytosol	60.38	61.24
CDX98830	Canola	cytosol	58.96	60.98
PGSC0003DMT400030430	Potato	cytoskeleton, cytosol, peroxisome	59.43	60.0
KRH53728	Soybean	endoplasmic reticulum, nucleus	58.49	59.33
KRH64204	Soybean	nucleus	58.02	58.85
HORVU5Hr1G046480.1	Barley	cytosol, golgi, mitochondrion, plastid	69.81	56.49
VIT_13s0067g02870.t01	Wine grape	extracellular	65.57	56.28
GSMUA_Achr11P...	Banana	cytosol	69.81	51.57
Os03t0819600-01	Rice	cytosol, plasma membrane	29.72	27.04

Protein Annotations

KEGG:00941+5.5.1.6	Gene3D:1.10.890.20	Gene3D:3.50.70.10	MapMan:35.1	EntrezGene:4351321	ProteinID:ABA96289.1
ProteinID:ABA96290.1	ProteinID:BAF29009.1	ProteinID:BAT15600.1	InterPro:Chalcone_isomerase	InterPro:Chalcone_isomerase_3-sand	InterPro:Chalcone_isomerase_bundle_sf
InterPro:Chalcone_isomerase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628
GO:GO:0009813	GO:GO:0016853	GO:GO:0016872	GO:GO:0045430	GO:GO:0080167	InterPro:IPR016088
InterPro:IPR016089	EnsemblPlantsGene:Os12g0115700	EnsemblPlants:Os12t0115700-01	PFAM:PF02431	PANTHER:PTHR28039	PANTHER:PTHR28039:SF4
UniProt:Q2QYK6	SUPFAM:SSF54626	UniParc:UPI0000681B6E	RefSeq:XP_015619944.1	SEG:seg	:

Description

chalcone isomeraseChalcone isomerase domain containing protein. (Os12t0115700-01)

Coordinates

chr12:-:766441..768578

Molecular Weight (calculated)

23620.2 Da

IEP (calculated)

4.555

GRAVY (calculated)

-0.140

Length

212 amino acids

Sequence
(BLAST)

001: MGTEMATVEV EGIPFPQEIT VSKPLSLLAH GITDIEIHFL QIKYNAIGVY LEKDNVLGHL ESWKGKKAEE LVQDDGFFQA LVSAPVEKLF RIVVIKEIKG
101: SQYGVQLESS VRDRLVSVDK YEDEEEESLE KVTEFFQSKY FKPNSVLTFH FPNTPGIAEI SFVTEGKGEA KLTVENKNVA EMIQKWYLGG ESAVSPTTVK
201: SLADQFAALL SA

Best Arabidopsis Sequence Match ( AT5G05270.2 )
(BLAST)

001: MGTEMVMVHE VPFPPQIITS KPLSLLGQGI TDIEIHFLQV KFTAIGVYLD PSDVKTHLDN WKGKTGKELA GDDDFFDALA SAEMEKVIRV VVIKEIKGAQ
101: YGVQLENTVR DRLAEEDKYE EEEETELEKV VGFFQSKYFK ANSVITYHFS AKDGICEIGF ETEGKEEEKL KVENANVVGM MQRWYLSGSR GVSPSTIVSI
201: ADSISAVLT

Arabidopsis Description

CHI3Probable chalcone--flavonone isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.