Factsheet for Zm00001d044683_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22932	Sorghum	cytosol	73.64	79.28
Os12t0115700-01	Rice	cytosol	64.44	72.64
Os11t0116300-01	Rice	cytosol, plasma membrane	64.02	72.17
TraesCS5B01G145800.1	Wheat	cytosol, golgi	61.09	67.28
TraesCS5A01G146900.1	Wheat	cytosol	61.09	67.28
TraesCS5D01G145400.1	Wheat	cytosol, golgi	60.67	66.82
Solyc05g052240.2.1	Tomato	cytosol	47.7	59.07
Bra009101.1-P	Field mustard	cytosol	49.37	57.56
CDX70163	Canola	cytosol	49.37	57.56
AT5G05270.1	Thale cress	cytosol	50.21	57.42
PGSC0003DMT400030430	Potato	cytoskeleton, cytosol, peroxisome	50.21	57.14
CDX98830	Canola	cytosol	48.95	57.07
KRH53728	Soybean	endoplasmic reticulum, nucleus	48.95	55.98
HORVU5Hr1G046480.1	Barley	cytosol, golgi, mitochondrion, plastid	60.25	54.96
KRH64204	Soybean	nucleus	47.7	54.55
VIT_13s0067g02870.t01	Wine grape	extracellular	54.39	52.63
GSMUA_Achr11P...	Banana	cytosol	56.07	46.69
Zm00001d012972_P001	Maize	cytosol	28.03	29.0
Zm00001d034635_P001	Maize	cytosol, extracellular	28.03	29.0

Protein Annotations

KEGG:00941+5.5.1.6	Gene3D:1.10.890.20	Gene3D:3.50.70.10	MapMan:35.1	UniProt:A0A1D6NQP7	InterPro:Chalcone_isomerase
InterPro:Chalcone_isomerase_3-sand	InterPro:Chalcone_isomerase_bundle_sf	InterPro:Chalcone_isomerase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0009628	GO:GO:0016853	GO:GO:0016872	GO:GO:0080167	InterPro:IPR016088	InterPro:IPR016089
ProteinID:ONM42252.1	PFAM:PF02431	PANTHER:PTHR28039	PANTHER:PTHR28039:SF4	SUPFAM:SSF54626	UniParc:UPI000842AF87
EnsemblPlantsGene:Zm00001d044683	EnsemblPlants:Zm00001d044683_P001	EnsemblPlants:Zm00001d044683_T001	SEG:seg	:	:

Description

Probable chalcone--flavonone isomerase 3

Coordinates

chr3:+:234824366..234825497

Molecular Weight (calculated)

25348.8 Da

IEP (calculated)

4.334

GRAVY (calculated)

0.034

Length

239 amino acids

Sequence
(BLAST)

001: MDDCDEEQRR CAVGSETETV NVEGIPFPAE ITVGNPLSLL GTGITDIEIH FLQIKYNAIG VYLHNAGGGD STTPTLLGHL GAWKGKTAEE LLADAAFWAA
101: LVAAPVEKLF RVVVIKEIKG SQYGVQLESS VRDRLAAADL YEDDEEEALE KVADFFQSKY FKPGSVVTFH FPAPASASPG PAAEITFATE GKGDARIAVE
201: NGNVAGMIQT WYLGGDSAVS PSTVRSLANR FAALLAVAA

Best Arabidopsis Sequence Match ( AT5G05270.2 )
(BLAST)

001: MGTEMVMVHE VPFPPQIITS KPLSLLGQGI TDIEIHFLQV KFTAIGVYLD PSDVKTHLDN WKGKTGKELA GDDDFFDALA SAEMEKVIRV VVIKEIKGAQ
101: YGVQLENTVR DRLAEEDKYE EEEETELEKV VGFFQSKYFK ANSVITYHFS AKDGICEIGF ETEGKEEEKL KVENANVVGM MQRWYLSGSR GVSPSTIVSI
201: ADSISAVLT

Arabidopsis Description

CHI3Probable chalcone--flavonone isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.