CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009101.1-P	Field mustard	cytosol	98.05	98.05
CDX70163	Canola	cytosol	98.05	98.05
AT5G05270.1	Thale cress	cytosol	90.73	89.0
Solyc05g052240.2.1	Tomato	cytosol	58.54	62.18
PGSC0003DMT400030430	Potato	cytoskeleton, cytosol, peroxisome	61.46	60.0
Os11t0116300-01	Rice	cytosol, plasma membrane	61.46	59.43
KRH53728	Soybean	endoplasmic reticulum, nucleus	60.49	59.33
Os12t0115700-01	Rice	cytosol	60.98	58.96
KRH64204	Soybean	nucleus	59.51	58.37
VIT_13s0067g02870.t01	Wine grape	extracellular	68.29	56.68
TraesCS5D01G145400.1	Wheat	cytosol, golgi	59.02	55.76
TraesCS5B01G145800.1	Wheat	cytosol, golgi	59.02	55.76
TraesCS5A01G146900.1	Wheat	cytosol	58.05	54.84
KXG22932	Sorghum	cytosol	58.54	54.05
Zm00001d044683_P001	Maize	cytosol, extracellular	57.07	48.95
HORVU5Hr1G046480.1	Barley	cytosol, golgi, mitochondrion, plastid	57.56	45.04
GSMUA_Achr11P...	Banana	cytosol	62.44	44.6
CDY53696	Canola	plastid	23.9	24.62
CDY47033	Canola	plastid	22.44	23.96
CDX72554	Canola	plastid	27.32	23.93
CDY40202	Canola	plastid	28.78	23.41
CDX73402	Canola	plastid	28.29	23.11
CDY65002	Canola	plastid	25.37	22.91
CDY71367	Canola	cytosol	8.29	17.89
CDX73401	Canola	plastid	25.85	17.43
CDY40203	Canola	plastid	21.95	16.36

Protein Annotations

KEGG:00941+5.5.1.6	Gene3D:1.10.890.20	Gene3D:3.50.70.10	MapMan:35.1	GO:A0A078E9R4	EnsemblPlants:CDX98830
ProteinID:CDX98830	ProteinID:CDX98830.1	InterPro:Chalcone_isomerase	InterPro:Chalcone_isomerase_3-sand	InterPro:Chalcone_isomerase_bundle_sf	InterPro:Chalcone_isomerase_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0016872	EnsemblPlantsGene:GSBRNA2T00106930001	InterPro:IPR016088
InterPro:IPR016089	PFAM:PF02431	PANTHER:PTHR28039	PANTHER:PTHR28039:SF4	MetaCyc:PWY-2002	MetaCyc:PWY-5059
MetaCyc:PWY-6325	MetaCyc:PWY-6787	MetaCyc:PWY-7397	SUPFAM:SSF54626	UniPathway:UPA00154	UniParc:UPI0004EE3245
SEG:seg	:	:	:	:	:

Description

BnaC09g50050D

Coordinates

chrLK031907:+:197440..198842

Molecular Weight (calculated)

22915.4 Da

IEP (calculated)

4.695

GRAVY (calculated)

-0.205

Length

205 amino acids

Sequence
(BLAST)

001: MVMIHEVPFP PQIITSKPFS LLGQGITDIE IHFLQVKFTA IGVYLDPSDV KTHLDKWKGK TGKDLAGDDD FFDALASGEI EKVIRVVVIK EIKGAQYGVQ
101: LENSVRDRLA AEDKYEEEEE NELEKVVGFF QSKYFKTHSI ITYRFSAKDG ICEIGFETEG KEEDKLKVEN ANVVGMMQKW YLSGSRGVSP STIVSLADSL
201: SAVLT

Best Arabidopsis Sequence Match ( AT5G05270.2 )
(BLAST)

001: MGTEMVMVHE VPFPPQIITS KPLSLLGQGI TDIEIHFLQV KFTAIGVYLD PSDVKTHLDN WKGKTGKELA GDDDFFDALA SAEMEKVIRV VVIKEIKGAQ
101: YGVQLENTVR DRLAEEDKYE EEEETELEKV VGFFQSKYFK ANSVITYHFS AKDGICEIGF ETEGKEEEKL KVENANVVGM MQRWYLSGSR GVSPSTIVSI
201: ADSISAVLT

Arabidopsis Description

CHI3Probable chalcone--flavonone isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.