Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY40202 | Canola | plastid | 97.61 | 97.22 |
CDY65002 | Canola | plastid | 77.69 | 85.9 |
CDY53696 | Canola | plastid | 64.94 | 81.91 |
AT3G55120.1 | Thale cress | plastid | 79.28 | 80.89 |
CDY47033 | Canola | plastid | 58.17 | 76.04 |
CDX72554 | Canola | plastid | 69.32 | 74.36 |
CDY71367 | Canola | cytosol | 25.1 | 66.32 |
VIT_13s0067g03820.t01 | Wine grape | extracellular | 60.16 | 64.53 |
CDX73401 | Canola | plastid | 73.31 | 60.53 |
KRG92978 | Soybean | plastid | 54.18 | 59.65 |
CDY40203 | Canola | plastid | 64.14 | 58.55 |
Solyc05g010310.2.1 | Tomato | cytosol | 51.39 | 58.11 |
Solyc05g010320.2.1 | Tomato | cytosol | 52.19 | 57.96 |
Zm00001d034635_P001 | Maize | cytosol, extracellular | 51.79 | 56.28 |
TraesCS5A01G475600.1 | Wheat | golgi, plastid | 49.4 | 54.15 |
EER90629 | Sorghum | cytosol | 49.8 | 54.11 |
Zm00001d012972_P001 | Maize | cytosol | 49.8 | 54.11 |
HORVU5Hr1G112670.1 | Barley | cytosol | 48.61 | 52.81 |
Os03t0819600-01 | Rice | cytosol, plasma membrane | 49.0 | 52.79 |
TraesCS5D01G489000.1 | Wheat | cytosol | 48.21 | 52.38 |
TraesCS5B01G488900.1 | Wheat | golgi | 47.41 | 51.52 |
GSMUA_Achr4P16830_001 | Banana | cytosol | 47.01 | 50.0 |
TraesCS7B01G038200.1 | Wheat | cytosol | 40.64 | 45.54 |
CDX70163 | Canola | cytosol | 23.51 | 28.78 |
CDX98830 | Canola | cytosol | 23.11 | 28.29 |
Protein Annotations
KEGG:00941+5.5.1.6 | Gene3D:1.10.890.20 | Gene3D:3.50.70.10 | MapMan:9.2.2.2.1 | GO:A0A078C953 | EnsemblPlants:CDX73402 |
ProteinID:CDX73402 | ProteinID:CDX73402.1 | InterPro:Chalcone_isomerase | InterPro:Chalcone_isomerase_3-sand | InterPro:Chalcone_isomerase_bundle_sf | InterPro:Chalcone_isomerase_sf |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016872 | EnsemblPlantsGene:GSBRNA2T00108884001 | InterPro:IPR016088 | InterPro:IPR016089 |
PFAM:PF02431 | PANTHER:PTHR28039 | PANTHER:PTHR28039:SF8 | MetaCyc:PWY-2002 | MetaCyc:PWY-5059 | MetaCyc:PWY-6325 |
MetaCyc:PWY-6787 | MetaCyc:PWY-7397 | SUPFAM:SSF54626 | UniPathway:UPA00154 | UniParc:UPI0001CAACB3 | : |
Description
BnaC08g26010D
Coordinates
chrLK031799:+:165395..167239
Molecular Weight (calculated)
26992.3 Da
IEP (calculated)
4.681
GRAVY (calculated)
-0.039
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSNCPSPL PTVTKLQVDS VTFPPSVISP ASSNPLFLGG AGVRGLDIQG KFVIFTVIGV YLDPVSVPSL SVKWKGKTTE ELTESVPFFR EIVTGSFEKF
101: IKVTMKLPLT GQQYSEKVTE NCVAIWKSLG IYTDSEAKAV ERFLEVFKDE TFPPGASILF ALASKGSLTV AFSKDDSIPE TGKAVIENKL LAEAVLESII
201: GKNGVSPGAR LSVAERLAQL MNSDKVEEDA TKTDQEEANN LPLGDKLAKE N
101: IKVTMKLPLT GQQYSEKVTE NCVAIWKSLG IYTDSEAKAV ERFLEVFKDE TFPPGASILF ALASKGSLTV AFSKDDSIPE TGKAVIENKL LAEAVLESII
201: GKNGVSPGAR LSVAERLAQL MNSDKVEEDA TKTDQEEANN LPLGDKLAKE N
001: MSSSNACASP SPFPAVTKLH VDSVTFVPSV KSPASSNPLF LGGAGVRGLD IQGKFVIFTV IGVYLEGNAV PSLSVKWKGK TTEELTESIP FFREIVTGAF
101: EKFIKVTMKL PLTGQQYSEK VTENCVAIWK QLGLYTDCEA KAVEKFLEIF KEETFPPGSS ILFALSPTGS LTVAFSKDDS IPETGIAVIE NKLLAEAVLE
201: SIIGKNGVSP GTRLSVAERL SQLMMKNKDE KEVSDHSVEE KLAKEN
101: EKFIKVTMKL PLTGQQYSEK VTENCVAIWK QLGLYTDCEA KAVEKFLEIF KEETFPPGSS ILFALSPTGS LTVAFSKDDS IPETGIAVIE NKLLAEAVLE
201: SIIGKNGVSP GTRLSVAERL SQLMMKNKDE KEVSDHSVEE KLAKEN
Arabidopsis Description
CHI1Chalcone--flavonone isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P41088]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.