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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • cytosol 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY40202 Canola plastid 97.61 97.22
CDY65002 Canola plastid 77.69 85.9
CDY53696 Canola plastid 64.94 81.91
AT3G55120.1 Thale cress plastid 79.28 80.89
CDY47033 Canola plastid 58.17 76.04
CDX72554 Canola plastid 69.32 74.36
CDY71367 Canola cytosol 25.1 66.32
VIT_13s0067g03820.t01 Wine grape extracellular 60.16 64.53
CDX73401 Canola plastid 73.31 60.53
KRG92978 Soybean plastid 54.18 59.65
CDY40203 Canola plastid 64.14 58.55
Solyc05g010310.2.1 Tomato cytosol 51.39 58.11
Solyc05g010320.2.1 Tomato cytosol 52.19 57.96
Zm00001d034635_P001 Maize cytosol, extracellular 51.79 56.28
TraesCS5A01G475600.1 Wheat golgi, plastid 49.4 54.15
EER90629 Sorghum cytosol 49.8 54.11
Zm00001d012972_P001 Maize cytosol 49.8 54.11
HORVU5Hr1G112670.1 Barley cytosol 48.61 52.81
Os03t0819600-01 Rice cytosol, plasma membrane 49.0 52.79
TraesCS5D01G489000.1 Wheat cytosol 48.21 52.38
TraesCS5B01G488900.1 Wheat golgi 47.41 51.52
GSMUA_Achr4P16830_001 Banana cytosol 47.01 50.0
TraesCS7B01G038200.1 Wheat cytosol 40.64 45.54
CDX70163 Canola cytosol 23.51 28.78
CDX98830 Canola cytosol 23.11 28.29
Protein Annotations
KEGG:00941+5.5.1.6Gene3D:1.10.890.20Gene3D:3.50.70.10MapMan:9.2.2.2.1GO:A0A078C953EnsemblPlants:CDX73402
ProteinID:CDX73402ProteinID:CDX73402.1InterPro:Chalcone_isomeraseInterPro:Chalcone_isomerase_3-sandInterPro:Chalcone_isomerase_bundle_sfInterPro:Chalcone_isomerase_sf
GO:GO:0003674GO:GO:0003824GO:GO:0016872EnsemblPlantsGene:GSBRNA2T00108884001InterPro:IPR016088InterPro:IPR016089
PFAM:PF02431PANTHER:PTHR28039PANTHER:PTHR28039:SF8MetaCyc:PWY-2002MetaCyc:PWY-5059MetaCyc:PWY-6325
MetaCyc:PWY-6787MetaCyc:PWY-7397SUPFAM:SSF54626UniPathway:UPA00154UniParc:UPI0001CAACB3:
Description
BnaC08g26010D
Coordinates
chrLK031799:+:165395..167239
Molecular Weight (calculated)
26992.3 Da
IEP (calculated)
4.681
GRAVY (calculated)
-0.039
Length
251 amino acids
Sequence
(BLAST)
001: MSSSNCPSPL PTVTKLQVDS VTFPPSVISP ASSNPLFLGG AGVRGLDIQG KFVIFTVIGV YLDPVSVPSL SVKWKGKTTE ELTESVPFFR EIVTGSFEKF
101: IKVTMKLPLT GQQYSEKVTE NCVAIWKSLG IYTDSEAKAV ERFLEVFKDE TFPPGASILF ALASKGSLTV AFSKDDSIPE TGKAVIENKL LAEAVLESII
201: GKNGVSPGAR LSVAERLAQL MNSDKVEEDA TKTDQEEANN LPLGDKLAKE N
Best Arabidopsis Sequence Match ( AT3G55120.1 )
(BLAST)
001: MSSSNACASP SPFPAVTKLH VDSVTFVPSV KSPASSNPLF LGGAGVRGLD IQGKFVIFTV IGVYLEGNAV PSLSVKWKGK TTEELTESIP FFREIVTGAF
101: EKFIKVTMKL PLTGQQYSEK VTENCVAIWK QLGLYTDCEA KAVEKFLEIF KEETFPPGSS ILFALSPTGS LTVAFSKDDS IPETGIAVIE NKLLAEAVLE
201: SIIGKNGVSP GTRLSVAERL SQLMMKNKDE KEVSDHSVEE KLAKEN
Arabidopsis Description
CHI1Chalcone--flavonone isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P41088]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.