Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX78547 | Canola | cytosol | 99.49 | 100.0 |
Bra006224.1-P | Field mustard | cytosol | 99.24 | 99.24 |
CDX69618 | Canola | cytosol | 96.97 | 97.22 |
CDY09836 | Canola | cytosol | 96.46 | 96.71 |
CDX91090 | Canola | cytosol | 95.96 | 95.96 |
AT5G13930.1 | Thale cress | cytosol | 95.2 | 95.44 |
CDY51056 | Canola | cytosol | 88.38 | 88.83 |
CDY05664 | Canola | cytosol | 87.37 | 87.82 |
KRH42776 | Soybean | cytosol | 56.06 | 87.06 |
KRG94730 | Soybean | cytosol | 85.35 | 86.44 |
GSMUA_Achr6P16370_001 | Banana | cytosol, mitochondrion, plastid | 68.18 | 86.26 |
VIT_14s0068g00920.t01 | Wine grape | cytosol | 85.61 | 86.26 |
VIT_05s0136g00260.t01 | Wine grape | cytosol | 84.34 | 85.86 |
VIT_14s0068g00930.t01 | Wine grape | cytosol | 85.1 | 85.75 |
Solyc05g053550.2.1 | Tomato | cytosol, mitochondrion | 84.09 | 85.6 |
PGSC0003DMT400049165 | Potato | cytosol, mitochondrion | 84.09 | 85.6 |
PGSC0003DMT400076178 | Potato | cytosol | 84.09 | 85.6 |
Solyc09g091510.2.1 | Tomato | cytosol, extracellular | 84.09 | 85.6 |
GSMUA_Achr6P10910_001 | Banana | cytosol, mitochondrion | 70.2 | 84.76 |
CDY07114 | Canola | cytosol | 87.63 | 84.63 |
KRH58872 | Soybean | cytosol | 82.58 | 84.28 |
KRH42783 | Soybean | cytosol | 82.58 | 84.28 |
KRH42780 | Soybean | cytosol | 82.58 | 84.28 |
KRH42778 | Soybean | cytosol | 82.58 | 84.28 |
KRH42775 | Soybean | cytosol | 82.58 | 84.28 |
KRH42759 | Soybean | cytosol | 82.58 | 84.28 |
KRH42758 | Soybean | cytosol | 82.58 | 84.28 |
KRH77699 | Soybean | endoplasmic reticulum | 82.58 | 84.06 |
KRH27737 | Soybean | cytosol | 82.58 | 84.06 |
KRH75544 | Soybean | cytosol | 82.32 | 84.02 |
KRH42757 | Soybean | cytosol | 82.32 | 84.02 |
KRH71115 | Soybean | cytosol | 82.07 | 83.76 |
KRH37579 | Soybean | cytosol | 82.07 | 83.76 |
KRH42760 | Soybean | cytosol | 82.07 | 83.76 |
EES09858 | Sorghum | cytosol | 84.34 | 83.29 |
EES09864 | Sorghum | cytosol | 83.84 | 83.0 |
EES09865 | Sorghum | cytosol | 83.84 | 82.79 |
TraesCS2A01G035300.1 | Wheat | cytosol | 82.32 | 82.74 |
GSMUA_Achr10P... | Banana | cytosol | 67.68 | 82.72 |
TraesCS2B01G558400.1 | Wheat | cytosol | 83.08 | 82.66 |
KXG29016 | Sorghum | cytosol | 83.59 | 82.54 |
EES09863 | Sorghum | cytosol | 83.59 | 82.54 |
EES09860 | Sorghum | cytosol | 83.59 | 82.54 |
EES09859 | Sorghum | cytosol | 83.59 | 82.54 |
EES08604 | Sorghum | cytosol | 83.59 | 82.54 |
TraesCS2D01G027900.2 | Wheat | cytosol | 82.07 | 82.49 |
TraesCS2D01G027700.1 | Wheat | cytosol | 82.07 | 82.49 |
TraesCS2B01G038700.1 | Wheat | cytosol | 82.07 | 82.49 |
TraesCS2A01G025600.1 | Wheat | cytosol | 82.07 | 82.49 |
TraesCS2A01G025700.1 | Wheat | cytosol, golgi | 82.07 | 82.49 |
TraesCS2A01G527700.2 | Wheat | cytosol | 82.83 | 82.41 |
HORVU2Hr1G005220.3 | Barley | cytosol | 82.07 | 82.28 |
Zm00001d052673_P001 | Maize | cytosol | 83.08 | 82.25 |
HORVU2Hr1G116390.2 | Barley | cytosol | 82.58 | 82.16 |
TraesCS2D01G034500.1 | Wheat | cytosol | 81.82 | 82.03 |
TraesCS2B01G048400.1 | Wheat | cytosol | 81.57 | 81.98 |
TraesCS2A01G025500.1 | Wheat | cytosol | 81.57 | 81.98 |
EES09862 | Sorghum | cytosol | 82.83 | 81.8 |
Zm00001d007403_P001 | Maize | cytosol | 82.58 | 81.55 |
Os11t0530600-01 | Rice | cytosol, mitochondrion, plasma membrane | 81.57 | 81.16 |
TraesCS2D01G027800.1 | Wheat | cytosol | 43.18 | 81.04 |
TraesCS2B01G038600.1 | Wheat | cytosol | 72.98 | 79.83 |
TraesCS2B01G613100.1 | Wheat | cytosol | 80.05 | 79.45 |
PGSC0003DMT400076179 | Potato | cytosol | 74.49 | 77.84 |
TraesCS5D01G488600.1 | Wheat | cytosol | 77.53 | 77.72 |
TraesCS5D01G488700.1 | Wheat | cytosol | 77.53 | 77.72 |
TraesCS1B01G041000.1 | Wheat | cytosol | 77.02 | 77.22 |
TraesCS1B01G040300.1 | Wheat | cytosol, mitochondrion | 76.77 | 76.96 |
TraesCS1B01G040000.1 | Wheat | cytosol, mitochondrion | 76.52 | 76.71 |
TraesCS1B01G040100.1 | Wheat | cytosol | 76.01 | 76.2 |
TraesCS1A01G032100.1 | Wheat | cytosol | 76.01 | 76.2 |
TraesCS1B01G040200.1 | Wheat | cytosol, mitochondrion | 77.02 | 75.87 |
TraesCS1D01G033600.1 | Wheat | cytosol | 76.26 | 75.69 |
TraesCS1D01G033800.1 | Wheat | cytosol | 76.01 | 75.63 |
TraesCS1A01G032300.1 | Wheat | cytosol | 76.01 | 75.63 |
TraesCS1B01G040500.1 | Wheat | cytosol | 76.01 | 75.44 |
HORVU2Hr1G004170.4 | Barley | plastid | 82.32 | 75.29 |
EES14634 | Sorghum | cytosol | 75.51 | 75.13 |
HORVU1Hr1G089540.1 | Barley | mitochondrion | 75.25 | 74.69 |
HORVU1Hr1G004830.1 | Barley | cytosol | 74.75 | 74.56 |
CDY05666 | Canola | mitochondrion | 77.27 | 73.21 |
GSMUA_Achr10P... | Banana | mitochondrion | 63.13 | 72.89 |
Os07t0214900-00 | Rice | cytosol | 71.46 | 70.22 |
TraesCS2D01G530600.1 | Wheat | cytosol, plastid | 82.83 | 68.62 |
CDX69091 | Canola | cytosol | 39.9 | 40.31 |
CDY40656 | Canola | cytosol | 39.65 | 40.05 |
CDX75466 | Canola | cytosol | 39.39 | 39.8 |
CDY34811 | Canola | cytosol | 39.39 | 39.8 |
CDX72506 | Canola | cytosol | 39.14 | 39.54 |
CDY58814 | Canola | cytosol | 39.14 | 39.54 |
CDY17490 | Canola | cytosol | 38.89 | 39.29 |
CDX93339 | Canola | mitochondrion | 38.89 | 39.19 |
CDY21499 | Canola | mitochondrion | 38.64 | 39.03 |
CDX83215 | Canola | mitochondrion | 38.64 | 39.03 |
CDY18415 | Canola | cytosol, mitochondrion | 38.64 | 38.93 |
Protein Annotations
KEGG:00941+2.3.1.74 | Gene3D:3.40.47.10 | MapMan:9.2.2.1.1.1 | GO:A0A078C6E7 | EnsemblPlants:CDX70528 | ProteinID:CDX70528 |
ProteinID:CDX70528.1 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_AS | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 |
EnsemblPlantsGene:GSBRNA2T00140359001 | InterPro:IPR016039 | PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | ScanProsite:PS00441 |
PANTHER:PTHR11877 | PANTHER:PTHR11877:SF43 | MetaCyc:PWY-5135 | MetaCyc:PWY-6316 | MetaCyc:PWY-6787 | MetaCyc:PWY-7397 |
InterPro:Polyketide_synthase_type-III | SUPFAM:SSF53901 | InterPro:Thiolase-like | UniPathway:UPA00154 | UniParc:UPI0001D16581 | : |
Description
BnaC03g06120D
Coordinates
chrLK031791:+:881360..882910
Molecular Weight (calculated)
43242.5 Da
IEP (calculated)
6.851
GRAVY (calculated)
-0.092
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMSRPSSSL DEIRKAQRAD GPAGILAIGT ANPANHVIQA EYPDYYFRIT NSEHMTDLKE KFKRMCDKSM IRKRHMHLTE EFLKENPNMC AYMAPSLDVR
101: QDIVVVEVPK LGKEAAVKAI KEWGQPKSKI THVVFCTTSG VDMPGADYQL TKLLGLRPSV KRLMMYQQGC FAGGTVLRLA KDLAENNRGA RVLVVCSEIT
201: AVTFRGPSDT HLDSLVGQAL FSDGAAALIV GSDPDASVGE KPIFEMVSAA QTILPDSDGA IDGHLREVGL TFHLLKDVPG LISKNIEKSL EEAFKPLGIS
301: DWNSLFWIAH PGGPAILDEV EKKLGLKAEK MRATRQVLSE YGNMSSACVL FILDEMRRKS AKDGVATTGE GLEWGVLFGF GPGLTVETVV LHSVPV
101: QDIVVVEVPK LGKEAAVKAI KEWGQPKSKI THVVFCTTSG VDMPGADYQL TKLLGLRPSV KRLMMYQQGC FAGGTVLRLA KDLAENNRGA RVLVVCSEIT
201: AVTFRGPSDT HLDSLVGQAL FSDGAAALIV GSDPDASVGE KPIFEMVSAA QTILPDSDGA IDGHLREVGL TFHLLKDVPG LISKNIEKSL EEAFKPLGIS
301: DWNSLFWIAH PGGPAILDEV EKKLGLKAEK MRATRQVLSE YGNMSSACVL FILDEMRRKS AKDGVATTGE GLEWGVLFGF GPGLTVETVV LHSVPV
001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
Arabidopsis Description
CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.