Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P16370_001 | Banana | cytosol, mitochondrion, plastid | 80.57 | 54.31 |
| TraesCS2A01G025700.1 | Wheat | cytosol, golgi | 94.31 | 50.51 |
| TraesCS2B01G038700.1 | Wheat | cytosol | 94.31 | 50.51 |
| TraesCS2D01G027700.1 | Wheat | cytosol | 94.31 | 50.51 |
| TraesCS2D01G027900.2 | Wheat | cytosol | 93.84 | 50.25 |
| TraesCS2D01G034500.1 | Wheat | cytosol | 92.89 | 49.62 |
| HORVU2Hr1G004170.4 | Barley | plastid | 94.31 | 45.96 |
| GSMUA_Achr6P10910_001 | Banana | cytosol, mitochondrion | 69.19 | 44.51 |
| PGSC0003DMT400076178 | Potato | cytosol | 81.99 | 44.47 |
| Solyc09g091510.2.1 | Tomato | cytosol, extracellular | 81.99 | 44.47 |
| VIT_14s0068g00930.t01 | Wine grape | cytosol | 82.46 | 44.27 |
| VIT_14s0068g00920.t01 | Wine grape | cytosol | 82.46 | 44.27 |
| GSMUA_Achr10P... | Banana | cytosol | 67.77 | 44.14 |
| Solyc05g053550.2.1 | Tomato | cytosol, mitochondrion | 81.04 | 43.96 |
| PGSC0003DMT400049165 | Potato | cytosol, mitochondrion | 81.04 | 43.96 |
| VIT_05s0136g00260.t01 | Wine grape | cytosol | 80.57 | 43.7 |
| CDX91090 | Canola | cytosol | 81.52 | 43.43 |
| CDX78547 | Canola | cytosol | 81.04 | 43.4 |
| KRH75544 | Soybean | cytosol | 79.62 | 43.3 |
| CDX69618 | Canola | cytosol | 81.04 | 43.29 |
| Bra008792.1-P | Field mustard | cytosol | 81.04 | 43.29 |
| KRG94730 | Soybean | cytosol | 80.09 | 43.22 |
| CDX70528 | Canola | cytosol | 81.04 | 43.18 |
| KRH42759 | Soybean | cytosol | 79.15 | 43.04 |
| KRH37579 | Soybean | cytosol | 79.15 | 43.04 |
| CDY09836 | Canola | cytosol | 80.57 | 43.04 |
| KRH42758 | Soybean | cytosol | 78.67 | 42.78 |
| KRH42775 | Soybean | cytosol | 78.67 | 42.78 |
| KRH42778 | Soybean | cytosol | 78.67 | 42.78 |
| KRH42780 | Soybean | cytosol | 78.67 | 42.78 |
| KRH42783 | Soybean | cytosol | 78.67 | 42.78 |
| KRH58872 | Soybean | cytosol | 78.67 | 42.78 |
| KRH71115 | Soybean | cytosol | 78.67 | 42.78 |
| TraesCS5D01G488600.1 | Wheat | cytosol | 79.62 | 42.53 |
| AT5G13930.1 | Thale cress | cytosol | 79.62 | 42.53 |
| TraesCS5D01G488700.1 | Wheat | cytosol | 79.62 | 42.53 |
| KRH42760 | Soybean | cytosol | 78.2 | 42.53 |
| KRH42757 | Soybean | cytosol | 78.2 | 42.53 |
| Bra006224.1-P | Field mustard | cytosol | 79.62 | 42.42 |
| Bra023441.1-P | Field mustard | cytosol | 78.67 | 42.13 |
| Bra036307.1-P | Field mustard | cytosol | 78.2 | 41.98 |
| KRH77699 | Soybean | endoplasmic reticulum | 77.25 | 41.9 |
| KRH27737 | Soybean | cytosol | 77.25 | 41.9 |
| TraesCS2D01G530600.1 | Wheat | cytosol, plastid | 94.79 | 41.84 |
| PGSC0003DMT400076179 | Potato | cytosol | 74.88 | 41.69 |
| GSMUA_Achr10P... | Banana | mitochondrion | 65.88 | 40.52 |
| CDY51056 | Canola | cytosol | 74.41 | 39.85 |
| TraesCS1D01G033800.1 | Wheat | cytosol | 74.41 | 39.45 |
| TraesCS1D01G033600.1 | Wheat | cytosol | 74.41 | 39.35 |
| CDY05664 | Canola | cytosol | 73.46 | 39.34 |
| Bra020688.1-P | Field mustard | cytosol | 72.99 | 39.09 |
| CDY07114 | Canola | cytosol | 75.36 | 38.78 |
| CDY05666 | Canola | mitochondrion | 73.93 | 37.32 |
| TraesCS6D01G278200.1 | Wheat | cytosol | 53.55 | 28.18 |
| TraesCS2D01G022700.1 | Wheat | cytosol, mitochondrion, plastid | 51.66 | 27.25 |
| TraesCS1D01G359600.1 | Wheat | cytosol | 50.71 | 27.16 |
| TraesCS2D01G016200.1 | Wheat | cytosol | 50.71 | 26.82 |
| TraesCS3D01G500500.1 | Wheat | cytosol | 50.24 | 26.43 |
| TraesCS7D01G046500.1 | Wheat | unclear | 49.29 | 26.33 |
| TraesCS2D01G051300.1 | Wheat | cytosol | 49.76 | 26.18 |
| TraesCS2D01G016100.1 | Wheat | cytosol | 48.82 | 26.14 |
| TraesCS4D01G351300.1 | Wheat | mitochondrion | 47.39 | 25.13 |
| TraesCS2D01G030600.1 | Wheat | mitochondrion | 45.5 | 24.87 |
| TraesCS7D01G046700.1 | Wheat | cytosol, mitochondrion | 46.45 | 24.81 |
| KRH42776 | Soybean | cytosol | 29.86 | 24.71 |
| TraesCS7D01G047000.1 | Wheat | cytosol, plastid | 46.45 | 24.62 |
| TraesCS7D01G089300.1 | Wheat | mitochondrion | 45.97 | 24.43 |
| TraesCS6D01G018500.1 | Wheat | plastid | 47.39 | 22.83 |
| TraesCS6D01G197900.1 | Wheat | cytosol | 29.38 | 21.38 |
| TraesCS1D01G157500.1 | Wheat | cytosol | 34.6 | 18.72 |
| TraesCS5D01G003600.1 | Wheat | cytosol | 34.12 | 17.1 |
Protein Annotations
| KEGG:00941+2.3.1.74 | Gene3D:3.40.47.10 | MapMan:50.2.3 | InterPro:Chalcone/stilbene_synthase_AS | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016746 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF00195 | ScanProsite:PS00441 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF44 |
| InterPro:Polyketide_synthase_type-III | SUPFAM:SSF53901 | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS2D01G027800 | EnsemblPlants:TraesCS2D01G027800.1 | SEG:seg |
Description
No Description!
Coordinates
chr2D:-:11495702..11496544
Molecular Weight (calculated)
23645.9 Da
IEP (calculated)
9.701
GRAVY (calculated)
-0.316
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATMTVEEV RKAQRAEGPA MVLAIGTATP ANCVYQADYS DYYFKITKSD HMADLKEKFK RMCDKSQIRK RYMHLTEEIL QENPNMCAYT APSLDARQDI
101: VVVEVPKLGK AAAQKAIKEW GQPRSKITHL VFCTTSGVDM PGADYQLTKM LGLRPSVKRL MMYQQGCFAG GTVLRLAKDL AENNRGARVL VVCSEITAAR
201: ACWWSARRSP R
101: VVVEVPKLGK AAAQKAIKEW GQPRSKITHL VFCTTSGVDM PGADYQLTKM LGLRPSVKRL MMYQQGCFAG GTVLRLAKDL AENNRGARVL VVCSEITAAR
201: ACWWSARRSP R
001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
Arabidopsis Description
CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.