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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX69931
CDX72554
CDX73401
CDX73402
CDX73739
CDX76159
CDX76765
CDX77983
CDX90656
CDX95155
CDY21246
CDY21556
CDY29008
CDY40202
CDY40203
CDY41522
CDY47033
CDY52372
CDY53696
CDY65002

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13930.1 CDX73739 AT3G51240.1 10536025
AT5G13930.1 CDX76159 AT3G51240.1 10536025
AT5G13930.1 CDX76765 AT3G51240.1 10536025
AT5G13930.1 CDX77983 AT3G51240.1 10536025
AT5G13930.1 CDX90656 AT3G51240.1 10536025
AT5G13930.1 CDY29008 AT3G51240.1 10536025
AT5G13930.1 CDX72554 AT3G55120.1 10536025
AT5G13930.1 CDX73401 AT3G55120.1 10536025
AT5G13930.1 CDX73402 AT3G55120.1 10536025
AT5G13930.1 CDY40202 AT3G55120.1 10536025
AT5G13930.1 CDY40203 AT3G55120.1 10536025
AT5G13930.1 CDY47033 AT3G55120.1 10536025
AT5G13930.1 CDY53696 AT3G55120.1 10536025
AT5G13930.1 CDY65002 AT3G55120.1 10536025
AT5G13930.1 CDX69931 AT5G08640.1 18467451
AT5G13930.1 CDY21556 AT5G08640.1 18467451
AT5G13930.1 CDX69931 AT5G08640.1 21669202
AT5G13930.1 CDY21556 AT5G08640.1 21669202
AT5G13930.1 CDX95155 AT5G42800.1 10536025
AT5G13930.1 CDY21246 AT5G42800.1 10536025
AT5G13930.1 CDY52372 AT5G42800.1 10536025
AT5G13930.1 CDX95155 AT5G42800.1 21669202
AT5G13930.1 CDY21246 AT5G42800.1 21669202
AT5G13930.1 CDY52372 AT5G42800.1 21669202
AT5G13930.1 CDY41522 AT5G63590.1 18467451
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra036307.1-P Field mustard cytosol 89.02 92.88
CDX78547 Canola cytosol 84.63 88.07
CDX69618 Canola cytosol 84.63 87.85
CDX70528 Canola cytosol 84.63 87.63
CDY09836 Canola cytosol 83.9 87.09
CDX91090 Canola cytosol 83.66 86.62
AT5G13930.1 Thale cress cytosol 82.44 85.57
KRH42776 Soybean cytosol 50.73 81.57
CDY51056 Canola cytosol 78.29 81.47
CDY05664 Canola cytosol 77.56 80.71
KRG94730 Soybean cytosol 76.83 80.56
VIT_14s0068g00920.t01 Wine grape cytosol 77.07 80.41
GSMUA_Achr6P16370_001 Banana cytosol, mitochondrion, plastid 61.22 80.19
VIT_05s0136g00260.t01 Wine grape cytosol 75.85 79.95
VIT_14s0068g00930.t01 Wine grape cytosol 76.34 79.64
Solyc09g091510.2.1 Tomato cytosol, extracellular 74.39 78.41
PGSC0003DMT400076178 Potato cytosol 74.39 78.41
KRH42759 Soybean cytosol 73.9 78.09
KRH42758 Soybean cytosol 73.66 77.84
KRH42775 Soybean cytosol 73.66 77.84
KRH58872 Soybean cytosol 73.66 77.84
KRH42783 Soybean cytosol 73.66 77.84
KRH42780 Soybean cytosol 73.66 77.84
KRH42778 Soybean cytosol 73.66 77.84
GSMUA_Achr6P10910_001 Banana cytosol, mitochondrion 62.2 77.74
KRH42757 Soybean cytosol 73.41 77.58
KRH37579 Soybean cytosol 73.41 77.58
KRH42760 Soybean cytosol 73.41 77.58
KRH75544 Soybean cytosol 73.41 77.58
GSMUA_Achr10P... Banana cytosol 61.22 77.47
TraesCS2D01G027700.1 Wheat cytosol 74.39 77.41
PGSC0003DMT400049165 Potato cytosol, mitochondrion 73.41 77.38
Solyc05g053550.2.1 Tomato cytosol, mitochondrion 73.41 77.38
KRH71115 Soybean cytosol 73.17 77.32
HORVU2Hr1G005220.3 Barley cytosol 74.39 77.22
TraesCS2A01G025600.1 Wheat cytosol 74.15 77.16
TraesCS2D01G027900.2 Wheat cytosol 74.15 77.16
TraesCS2A01G035300.1 Wheat cytosol 74.15 77.16
Zm00001d052673_P001 Maize cytosol 75.12 77.0
TraesCS2A01G025700.1 Wheat cytosol, golgi 73.9 76.9
TraesCS2B01G038700.1 Wheat cytosol 73.9 76.9
TraesCS2B01G558400.1 Wheat cytosol 74.63 76.88
KRH27737 Soybean cytosol 72.93 76.86
KRH77699 Soybean endoplasmic reticulum 72.93 76.86
TraesCS2A01G025500.1 Wheat cytosol 73.66 76.65
TraesCS2B01G048400.1 Wheat cytosol 73.66 76.65
TraesCS2A01G527700.2 Wheat cytosol 74.39 76.63
EES09858 Sorghum cytosol 74.88 76.56
TraesCS2D01G034500.1 Wheat cytosol 73.66 76.46
HORVU2Hr1G116390.2 Barley cytosol 74.15 76.38
EES09864 Sorghum cytosol 74.39 76.25
EES09865 Sorghum cytosol 74.39 76.06
Zm00001d007403_P001 Maize cytosol 74.39 76.06
Os11t0530600-01 Rice cytosol, mitochondrion, plasma membrane 73.66 75.88
EES08604 Sorghum cytosol 74.15 75.81
KXG29016 Sorghum cytosol 74.15 75.81
EES09863 Sorghum cytosol 74.15 75.81
EES09859 Sorghum cytosol 74.15 75.81
EES09860 Sorghum cytosol 74.15 75.81
TraesCS2D01G027800.1 Wheat cytosol 38.78 75.36
EES09862 Sorghum cytosol 73.41 75.06
TraesCS2B01G613100.1 Wheat cytosol 71.95 73.93
TraesCS2B01G038600.1 Wheat cytosol 65.12 73.76
TraesCS1B01G041000.1 Wheat cytosol 70.24 72.91
TraesCS1B01G040300.1 Wheat cytosol, mitochondrion 69.76 72.41
PGSC0003DMT400076179 Potato cytosol 66.83 72.3
TraesCS5D01G488600.1 Wheat cytosol 69.51 72.15
TraesCS1B01G040000.1 Wheat cytosol, mitochondrion 69.51 72.15
TraesCS5D01G488700.1 Wheat cytosol 69.51 72.15
TraesCS1A01G032100.1 Wheat cytosol 69.27 71.9
TraesCS1B01G040100.1 Wheat cytosol 69.02 71.65
TraesCS1D01G033600.1 Wheat cytosol 69.51 71.43
TraesCS1B01G040200.1 Wheat cytosol, mitochondrion 70.0 71.39
TraesCS1D01G033800.1 Wheat cytosol 69.27 71.36
TraesCS1A01G032300.1 Wheat cytosol 69.27 71.36
TraesCS1B01G040500.1 Wheat cytosol 69.27 71.18
EES14634 Sorghum cytosol 68.05 70.1
HORVU1Hr1G004830.1 Barley cytosol 67.8 70.03
HORVU2Hr1G004170.4 Barley plastid 73.66 69.75
HORVU1Hr1G089540.1 Barley mitochondrion 67.56 69.42
GSMUA_Achr10P... Banana mitochondrion 57.56 68.8
Os07t0214900-00 Rice cytosol 66.1 67.25
CDY05666 Canola mitochondrion 68.05 66.75
TraesCS2D01G530600.1 Wheat cytosol, plastid 74.39 63.81
CDX69091 Canola cytosol 35.37 36.99
CDX75466 Canola cytosol 35.12 36.73
CDX72506 Canola cytosol 35.12 36.73
CDY40656 Canola cytosol 35.12 36.73
CDY34811 Canola cytosol 35.12 36.73
CDY58814 Canola cytosol 34.88 36.48
CDX83215 Canola mitochondrion 34.63 36.22
CDY17490 Canola cytosol 34.63 36.22
CDY21499 Canola mitochondrion 34.63 36.22
CDX93339 Canola mitochondrion 34.15 35.62
CDY18415 Canola cytosol, mitochondrion 33.9 35.37
Protein Annotations
KEGG:00941+2.3.1.74Gene3D:3.40.47.10MapMan:9.2.2.1.1.1GO:A0A078F2H1EnsemblPlants:CDY07114ProteinID:CDY07114
ProteinID:CDY07114.1InterPro:Chalcone/stilbene_synth_CInterPro:Chalcone/stilbene_synthase_ASInterPro:Chalcone/stilbene_synthase_NGO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016740GO:GO:0016746GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00123457001InterPro:IPR016039PFAM:PF00195PFAM:PF02797PIRSF:PIRSF000451ScanProsite:PS00441
PANTHER:PTHR11877PANTHER:PTHR11877:SF44MetaCyc:PWY-5135MetaCyc:PWY-6316MetaCyc:PWY-6787MetaCyc:PWY-7397
InterPro:Polyketide_synthase_type-IIISUPFAM:SSF53901InterPro:Thiolase-likeUniPathway:UPA00154UniParc:UPI0004EDD274SEG:seg
Description
BnaCnng01290D
Coordinates
chrLK031975:-:203283..209948
Molecular Weight (calculated)
45724.9 Da
IEP (calculated)
8.033
GRAVY (calculated)
-0.036
Length
410 amino acids
Sequence
(BLAST)
001: MKLIRWCIIR YGDIRVKDIK LIYIFFELKL IHSEIKNRTG AIGTANPANH VIQAEYPDYY FRITNSEHMI DLKEKFKRMC DKSGIRKRHM HLTEEFLKDN
101: PNMCAYMAPS LDVRQDVVVV EVPKLGKEAA EKAIKEWGQP KSRITHLVFC TTSGVDMPGA DYQLTKLLGL CPSVKRLMMY QQGCFAGATV LRLAKDLAEN
201: NRGARVLVVC SEIIALIFRG PSDTHLDSLL GQALFSDGAA ALVVGSDPDI SVGEKPIFEM VSAAQTILPD SDGAINLQLR ETGLTFHLLK HVPRLISKNI
301: EKSLHEAFKP LGISDWNSLF WIAHPGGRAI LDEVEKKLGL KAEKMRATRH VLSEYGNMTS ACVLFILDEM RRKSAEDGVA TTGEGLEWGV LFGFGPGLTV
401: ETVVLHSVPF
Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.