Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G34850.1 | CDY03253 | AT1G62940.1 | 23632852 |
| AT4G34850.1 | CDY39816 | AT1G62940.1 | 23632852 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034658.1-P | Field mustard | cytosol | 97.7 | 97.7 |
| CDY58814 | Canola | cytosol | 97.45 | 97.45 |
| CDX75466 | Canola | cytosol | 95.66 | 95.66 |
| CDY40656 | Canola | cytosol | 95.41 | 95.41 |
| CDY34811 | Canola | cytosol | 94.9 | 94.9 |
| CDX69091 | Canola | cytosol | 94.64 | 94.64 |
| CDX72506 | Canola | cytosol | 93.62 | 93.62 |
| AT4G34850.1 | Thale cress | cytosol | 92.6 | 92.6 |
| KRH29108 | Soybean | cytosol | 79.59 | 80.62 |
| VIT_03s0038g01460.t01 | Wine grape | cytosol | 80.61 | 80.61 |
| PGSC0003DMT400004133 | Potato | cytosol | 77.3 | 79.74 |
| Solyc01g111070.2.1 | Tomato | cytosol | 76.79 | 78.59 |
| KRH24136 | Soybean | cytosol | 70.15 | 72.94 |
| Os07t0411300-00 | Rice | cytosol | 68.88 | 66.67 |
| EER98407 | Sorghum | cytosol | 68.88 | 64.59 |
| TraesCS5A01G002900.1 | Wheat | cytosol | 68.62 | 63.74 |
| TraesCS5B01G003100.1 | Wheat | cytosol | 68.11 | 63.72 |
| Zm00001d019478_P001 | Maize | cytosol | 67.6 | 63.55 |
| TraesCS5D01G003600.1 | Wheat | cytosol | 68.11 | 63.42 |
| CDX93339 | Canola | mitochondrion | 63.27 | 63.1 |
| CDY18415 | Canola | cytosol, mitochondrion | 63.01 | 62.85 |
| CDY21499 | Canola | mitochondrion | 61.22 | 61.22 |
| CDX83215 | Canola | mitochondrion | 60.97 | 60.97 |
| HORVU5Hr1G000690.2 | Barley | cytosol, peroxisome | 69.13 | 59.3 |
| CDY05664 | Canola | cytosol | 40.05 | 39.85 |
| CDY51056 | Canola | cytosol | 39.8 | 39.59 |
| CDX69618 | Canola | cytosol | 39.54 | 39.24 |
| CDY09836 | Canola | cytosol | 39.54 | 39.24 |
| CDX78547 | Canola | cytosol | 39.29 | 39.09 |
| CDX70528 | Canola | cytosol | 39.29 | 38.89 |
| CDX91090 | Canola | cytosol | 39.03 | 38.64 |
| GSMUA_Achr5P17860_001 | Banana | cytosol, nucleus, peroxisome | 66.84 | 34.84 |
| CDY07114 | Canola | cytosol | 36.22 | 34.63 |
| CDY05666 | Canola | mitochondrion | 36.73 | 34.45 |
Protein Annotations
| MapMan:21.8.1.4 | Gene3D:3.40.47.10 | GO:A0A078FSJ2 | UniProt:A0A078FSJ2 | EnsemblPlants:CDY17490 | ProteinID:CDY17490 |
| ProteinID:CDY17490.1 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | EnsemblPlantsGene:GSBRNA2T00095676001 |
| InterPro:IPR016039 | PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF31 |
| InterPro:Polyketide_synthase_type-III | SUPFAM:SSF53901 | InterPro:Thiolase-like | UniParc:UPI0004EDB9FF | : | : |
Description
BnaC03g65730DBnaC03g65730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSJ2]
Coordinates
chrLK032074:+:258660..260149
Molecular Weight (calculated)
42809.3 Da
IEP (calculated)
5.189
GRAVY (calculated)
-0.218
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSIDATELG SEKKPNPGKA TILAIGKAFP QQLVMQEYLV DGYFKTTNCD DPELKQKLTR LCNTTTVKTR YVVMSEEILN KYPELATEGG STVKQRLDIC
101: NDAVTEMAVE ASRACIENWG RSISDITHLV YVSSSEARLP GGDLYLAKGL GLSPETHRVL LYFVGCSGGV AGLRVAKDIA ENNPGSRVLL ATSETTIIGF
201: KPPSADRPYD LVGVALFGDG AGAMIIGSDP DPVREKPLFE LHTAIQNFLP DTEKTIDGKL TEQGINFTLS RELPQIIEDN VDSFCKKLIG KAGLAHKDYN
301: QMFWAVHPGG PAILNRMEKR LNLSPEKLSP SRRALMDYGN ASSNSIVYVL EYMLEESRKA RNMNEGGNEW GLILAFGPGV TFEGIVARNI DV
101: NDAVTEMAVE ASRACIENWG RSISDITHLV YVSSSEARLP GGDLYLAKGL GLSPETHRVL LYFVGCSGGV AGLRVAKDIA ENNPGSRVLL ATSETTIIGF
201: KPPSADRPYD LVGVALFGDG AGAMIIGSDP DPVREKPLFE LHTAIQNFLP DTEKTIDGKL TEQGINFTLS RELPQIIEDN VDSFCKKLIG KAGLAHKDYN
301: QMFWAVHPGG PAILNRMEKR LNLSPEKLSP SRRALMDYGN ASSNSIVYVL EYMLEESRKA RNMNEGGNEW GLILAFGPGV TFEGIVARNI DV
001: MGSIDAAVLG SEKKSNPGKA TILALGKAFP HQLVMQEYLV DGYFKTTKCD DPELKQKLTR LCKTTTVKTR YVVMSEEILK KYPELAIEGG STVTQRLDIC
101: NDAVTEMAVE ASRACIKNWG RSISDITHVV YVSSSEARLP GGDLYLAKGL GLSPDTHRVL LYFVGCSGGV AGLRVAKDIA ENNPGSRVLL ATSETTIIGF
201: KPPSVDRPYD LVGVALFGDG AGAMIIGSDP DPICEKPLFE LHTAIQNFLP ETEKTIDGRL TEQGINFKLS RELPQIIEDN VENFCKKLIG KAGLAHKNYN
301: QMFWAVHPGG PAILNRIEKR LNLSPEKLSP SRRALMDYGN ASSNSIVYVL EYMLEESKKV RNMNEEENEW GLILAFGPGV TFEGIIARNL DV
101: NDAVTEMAVE ASRACIKNWG RSISDITHVV YVSSSEARLP GGDLYLAKGL GLSPDTHRVL LYFVGCSGGV AGLRVAKDIA ENNPGSRVLL ATSETTIIGF
201: KPPSVDRPYD LVGVALFGDG AGAMIIGSDP DPICEKPLFE LHTAIQNFLP ETEKTIDGRL TEQGINFKLS RELPQIIEDN VENFCKKLIG KAGLAHKNYN
301: QMFWAVHPGG PAILNRIEKR LNLSPEKLSP SRRALMDYGN ASSNSIVYVL EYMLEESKKV RNMNEEENEW GLILAFGPGV TFEGIIARNL DV
Arabidopsis Description
PKSBPSKB [Source:UniProtKB/TrEMBL;Acc:A0A178UTW2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.