Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDX69091 | endoplasmic reticulum |
| CDX72506 | endoplasmic reticulum |
| CDX75466 | endoplasmic reticulum |
| CDX90022 | |
| CDX93339 | endoplasmic reticulum |
| CDY15188 | |
| CDY17490 | endoplasmic reticulum |
| CDY18415 | endoplasmic reticulum |
| CDY34811 | endoplasmic reticulum |
| CDY38002 | |
| CDY40656 | endoplasmic reticulum |
| CDY58814 | endoplasmic reticulum |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G62940.1 | Thale cress | peroxisome | 94.26 | 93.91 |
| VIT_01s0010g03720.t01 | Wine grape | peroxisome | 73.89 | 71.89 |
| KRH46374 | Soybean | peroxisome | 71.85 | 70.16 |
| Solyc02g088710.2.1 | Tomato | peroxisome | 71.3 | 69.62 |
| GSMUA_Achr6P36020_001 | Banana | peroxisome | 63.33 | 69.09 |
| KRG98485 | Soybean | peroxisome | 70.74 | 69.08 |
| HORVU2Hr1G066630.1 | Barley | cytosol, mitochondrion, peroxisome, plastid | 56.85 | 68.07 |
| Os04t0310800-01 | Rice | peroxisome | 63.89 | 62.16 |
| EER99996 | Sorghum | plastid | 65.19 | 58.18 |
| TraesCS2B01G291100.1 | Wheat | plastid | 65.93 | 57.51 |
| TraesCS2A01G272900.1 | Wheat | plastid | 65.93 | 57.42 |
| TraesCS2D01G272200.1 | Wheat | plastid | 65.56 | 57.19 |
| Zm00001d003702_P001 | Maize | plastid | 64.44 | 57.05 |
| CDY45731 | Canola | peroxisome | 14.44 | 50.65 |
| CDY53918 | Canola | peroxisome | 17.41 | 50.27 |
| CDY32418 | Canola | peroxisome | 16.11 | 47.54 |
| CDY45730 | Canola | vacuole | 33.15 | 39.0 |
| KXG26308 | Sorghum | peroxisome | 39.26 | 38.9 |
| CDY71478 | Canola | vacuole | 32.59 | 38.34 |
| CDY43921 | Canola | peroxisome | 38.89 | 38.11 |
| CDX96638 | Canola | peroxisome | 37.04 | 37.95 |
| CDX87831 | Canola | peroxisome | 38.33 | 37.57 |
| CDY31472 | Canola | peroxisome | 35.74 | 37.55 |
| CDY29527 | Canola | peroxisome | 36.67 | 37.36 |
| CDY19568 | Canola | peroxisome | 37.96 | 37.14 |
| Bra036646.1-P | Field mustard | peroxisome | 99.81 | 36.44 |
| CDY46375 | Canola | peroxisome | 36.11 | 35.98 |
| CDY48875 | Canola | mitochondrion, plastid, vacuole | 29.44 | 35.81 |
| CDY39155 | Canola | peroxisome | 35.93 | 35.79 |
| CDY07442 | Canola | peroxisome | 36.67 | 35.61 |
| CDY39293 | Canola | peroxisome | 36.67 | 35.55 |
| CDY68920 | Canola | peroxisome | 36.3 | 35.44 |
| CDY33631 | Canola | plastid | 35.93 | 35.08 |
| CDX96633 | Canola | plastid | 35.93 | 35.08 |
| CDX96636 | Canola | golgi, vacuole | 24.81 | 34.99 |
| CDY06431 | Canola | peroxisome | 35.74 | 34.9 |
| CDY33627 | Canola | peroxisome | 35.93 | 34.83 |
| CDY39153 | Canola | peroxisome | 34.63 | 34.69 |
| CDY03253 | Canola | peroxisome | 99.07 | 34.67 |
| CDY46376 | Canola | peroxisome | 34.26 | 34.32 |
| CDY19570 | Canola | peroxisome | 35.37 | 34.17 |
| Zm00001d039274_P003 | Maize | peroxisome | 63.7 | 34.13 |
| CDX82208 | Canola | peroxisome | 36.11 | 34.09 |
| CDY31883 | Canola | plastid | 34.26 | 34.07 |
| CDY32416 | Canola | peroxisome | 35.93 | 33.8 |
| CDY01369 | Canola | plastid | 33.7 | 33.52 |
| CDY33628 | Canola | plastid | 33.89 | 33.15 |
| CDX78914 | Canola | peroxisome, plastid | 34.81 | 32.75 |
| CDX96637 | Canola | plastid | 33.52 | 32.73 |
| CDY01370 | Canola | peroxisome, plastid | 33.33 | 32.73 |
| CDY33629 | Canola | golgi, vacuole | 24.81 | 31.68 |
| CDY31474 | Canola | peroxisome | 33.33 | 31.03 |
| CDY06435 | Canola | vacuole | 22.96 | 27.87 |
| CDX99401 | Canola | peroxisome | 31.48 | 25.45 |
| CDY71190 | Canola | peroxisome | 17.41 | 25.41 |
| CDY65966 | Canola | peroxisome | 16.11 | 24.65 |
| CDX78913 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:21.8.1.2 | Gene3D:3.30.300.30 | Gene3D:3.40.50.12780 | GO:A0A078HQA1 | UniProt:A0A078HQA1 | InterPro:AMP-bd_C |
| InterPro:AMP-dep_Synth/Lig | EnsemblPlants:CDY39816 | ProteinID:CDY39816 | ProteinID:CDY39816.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00068630001 |
| PFAM:PF00501 | PFAM:PF13193 | PANTHER:PTHR24096 | PANTHER:PTHR24096:SF312 | SUPFAM:SSF56801 | TMHMM:TMhelix |
| UniParc:UPI0004EF2DA2 | SEG:seg | : | : | : | : |
Description
BnaA09g10680DBnaA09g10680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQA1]
Coordinates
chrLK032457:+:296201..299691
Molecular Weight (calculated)
59114.1 Da
IEP (calculated)
5.879
GRAVY (calculated)
0.076
Length
540 amino acids
Sequence
(BLAST)
(BLAST)
001: METQKQDNEH IFRSLYPSVP IPDKLTLPEF VLQGVEEFTE NVAFVEAVTG KAVTYGDVVR DTKRLAKALT SLGLRKGQVM VVVLPNVAEY GIIALGIMSA
101: GGVFSGANPT ALVSEIKKQV EASGARGIIT DSTNFEKVKA LGLPVIVLGE EKIEGAVNWK DLLEAGDRSG DNNREKILQT DLCALPFSSG TTGLQKGVML
201: THRNLIANLC STLFSVRSEM IGQIVTLGLI PFFHIYGIVG ICCATMKNKG KVVAMSRYDL RLFLNALITH EVLFAPIVPP IILNLVKNPI VDEFDLSKLK
301: LRSVMTAAAP LAPELLTAFE AKFPNVQAYG LTEHSCITLT HGDPDKGQGI AKRNSVGFIL PNLEVKFIDP DTGRSLPKNT SGELCVRSQC VMQGYFENKE
401: ETEKTIDEEG WLHTGDIGYI DDDGDIFIVD RIKELIKYKG FQVAPAELEA ILLTHPSVED VAVVPLPDEE AGEIPVACVV MNPKAKEKEE DILSFVAANV
501: AHYKKIRAVH FVDSIPKSLS GKIMRRLLRD NILSIKKTLF
101: GGVFSGANPT ALVSEIKKQV EASGARGIIT DSTNFEKVKA LGLPVIVLGE EKIEGAVNWK DLLEAGDRSG DNNREKILQT DLCALPFSSG TTGLQKGVML
201: THRNLIANLC STLFSVRSEM IGQIVTLGLI PFFHIYGIVG ICCATMKNKG KVVAMSRYDL RLFLNALITH EVLFAPIVPP IILNLVKNPI VDEFDLSKLK
301: LRSVMTAAAP LAPELLTAFE AKFPNVQAYG LTEHSCITLT HGDPDKGQGI AKRNSVGFIL PNLEVKFIDP DTGRSLPKNT SGELCVRSQC VMQGYFENKE
401: ETEKTIDEEG WLHTGDIGYI DDDGDIFIVD RIKELIKYKG FQVAPAELEA ILLTHPSVED VAVVPLPDEE AGEIPVACVV MNPKAKEKEE DILSFVAANV
501: AHYKKIRAVH FVDSIPKSLS GKIMRRLLRD NILSIKKTLF
001: MESQKQEDNE YIFRSLYPSV PIPDKLTLPE FVLQGVEEYT ENVAFVEAVT GKAVTYGDVV RDTKRLAKAL TSLGLRKGQV MVVVLPNVAE YGIIALGIMS
101: AGGVFSGANP TALVSEIKKQ VEASGARGII TDATNYEKVK SLGLPVIVLG EEKIEGAVNW KDLLEAGDKC GDTDNEEILQ TDLCALPFSS GTTGLQKGVM
201: LTHRNLIANL CSTLFGVRSE MIGQIVTLGL IPFFHIYGIV GICCATMKNK GKVVAMSRYD LRIFLNALIA HEVSFAPIVP PIILNLVKNP IVDEFDLSKL
301: KLQSVMTAAA PLAPELLTAF EAKFPNVQVQ EAYGLTEHSC ITLTHGDPEK GQGIAKRNSV GFILPNLEVK FIDPDTGRSL PKNTSGELCV RSQCVMQGYF
401: MNKEETDKTI DEQGWLHTGD IGYIDDDGDI FIVDRIKELI KYKGFQVAPA ELEAILLTHP SVEDVAVVPL PDEEAGEIPA ACVVINPKAT EKEEDILNFV
501: AANVAHYKKV RAVHFVDSIP KSLSGKIMRR LLRDKILSIN KK
101: AGGVFSGANP TALVSEIKKQ VEASGARGII TDATNYEKVK SLGLPVIVLG EEKIEGAVNW KDLLEAGDKC GDTDNEEILQ TDLCALPFSS GTTGLQKGVM
201: LTHRNLIANL CSTLFGVRSE MIGQIVTLGL IPFFHIYGIV GICCATMKNK GKVVAMSRYD LRIFLNALIA HEVSFAPIVP PIILNLVKNP IVDEFDLSKL
301: KLQSVMTAAA PLAPELLTAF EAKFPNVQVQ EAYGLTEHSC ITLTHGDPEK GQGIAKRNSV GFILPNLEVK FIDPDTGRSL PKNTSGELCV RSQCVMQGYF
401: MNKEETDKTI DEQGWLHTGD IGYIDDDGDI FIVDRIKELI KYKGFQVAPA ELEAILLTHP SVEDVAVVPL PDEEAGEIPA ACVVINPKAT EKEEDILNFV
501: AANVAHYKKV RAVHFVDSIP KSLSGKIMRR LLRDKILSIN KK
Arabidopsis Description
4CLL14-coumarate--CoA ligase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ12]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.