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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43921 Canola peroxisome 98.73 98.73
AT1G51680.1 Thale cress peroxisome 92.56 90.91
CDY19568 Canola peroxisome 80.76 80.62
CDY53918 Canola peroxisome 25.05 73.8
PGSC0003DMT400074444 Potato peroxisome 70.6 71.64
Solyc06g068650.2.1 Tomato peroxisome 70.05 71.09
GSMUA_Achr4P12590_001 Banana peroxisome 62.98 70.96
PGSC0003DMT400036886 Potato peroxisome 69.33 70.09
Solyc03g117870.2.1 Tomato plastid 69.15 69.91
KRH09616 Soybean mitochondrion, peroxisome 68.06 69.7
KRH23700 Soybean peroxisome 69.15 69.65
GSMUA_Achr9P22840_001 Banana peroxisome 48.28 69.63
GSMUA_Achr1P23450_001 Banana peroxisome 65.7 69.62
GSMUA_AchrUn_... Banana peroxisome 65.15 69.31
GSMUA_Achr7P05070_001 Banana peroxisome 61.71 68.97
GSMUA_Achr4P05820_001 Banana peroxisome 64.97 68.58
CDY32418 Canola peroxisome 22.5 67.76
PGSC0003DMT400037485 Potato peroxisome 66.24 66.61
Solyc12g042460.1.1 Tomato peroxisome 65.7 66.06
CDY48875 Canola mitochondrion, plastid, vacuole 52.63 65.32
TraesCS2D01G150400.1 Wheat peroxisome 62.61 63.89
TraesCS2B01G171200.1 Wheat peroxisome 62.43 63.7
TraesCS2A01G145800.1 Wheat peroxisome 62.07 63.1
EER90150 Sorghum peroxisome 63.52 62.84
CDY19570 Canola peroxisome 63.7 62.79
TraesCS6B01G179900.2 Wheat peroxisome 62.43 62.77
TraesCS6A01G151700.1 Wheat peroxisome 62.07 62.64
CDX82208 Canola peroxisome 64.97 62.59
TraesCS6D01G141700.1 Wheat peroxisome 62.25 62.48
CDY32416 Canola peroxisome 64.97 62.37
Os08t0448000-01 Rice peroxisome 60.8 62.15
TraesCS7A01G496200.1 Wheat peroxisome 62.79 62.12
HORVU6Hr1G030390.2 Barley peroxisome 62.25 62.03
TraesCS7D01G483400.1 Wheat peroxisome 62.98 61.96
CDY06431 Canola peroxisome 62.07 61.84
Os02t0177600-01 Rice plasma membrane 62.07 61.73
Os06t0656500-01 Rice peroxisome 62.61 61.72
CDY68920 Canola peroxisome 61.89 61.66
EES15085 Sorghum peroxisome 61.52 61.41
EES04623 Sorghum peroxisome 61.52 61.08
CDY07442 Canola peroxisome 60.98 60.43
Zm00001d032103_P001 Maize peroxisome 60.8 60.36
CDY39293 Canola peroxisome 60.98 60.32
Os08t0245200-01 Rice extracellular 61.71 60.28
EES13602 Sorghum peroxisome 61.71 59.54
Zm00001d050224_P002 Maize peroxisome 59.89 58.93
HORVU7Hr1G111130.3 Barley peroxisome, plastid 62.79 58.64
Zm00001d015459_P003 Maize peroxisome 60.98 57.24
Zm00001d046915_P001 Maize extracellular 63.7 54.93
CDY06435 Canola vacuole 44.28 54.83
CDY65966 Canola peroxisome 34.66 54.11
CDY71190 Canola peroxisome 34.85 51.89
CDY45731 Canola peroxisome 13.79 49.35
CDY46375 Canola peroxisome 41.02 41.7
CDY39155 Canola peroxisome 40.83 41.51
HORVU0Hr1G002720.3 Barley mitochondrion, plastid 40.29 40.66
CDY46376 Canola peroxisome 38.84 39.7
CDY39153 Canola peroxisome 38.29 39.15
CDY39816 Canola peroxisome 37.57 38.33
CDY71478 Canola vacuole 31.76 38.13
CDY45730 Canola vacuole 31.58 37.91
CDY33631 Canola plastid 37.93 37.79
CDX96633 Canola plastid 37.93 37.79
CDY29527 Canola peroxisome 36.12 37.55
CDX96638 Canola peroxisome 35.57 37.19
CDY31472 Canola peroxisome 34.48 36.97
CDX96636 Canola golgi, vacuole 25.41 36.55
CDY01369 Canola plastid 35.57 36.1
CDY31883 Canola plastid 35.39 35.91
CDX96637 Canola plastid 35.39 35.26
CDX78914 Canola peroxisome, plastid 36.66 35.19
CDY33628 Canola plastid 35.21 35.14
CDY01370 Canola peroxisome, plastid 35.03 35.09
CDY33627 Canola peroxisome 34.85 34.47
CDY31474 Canola peroxisome 34.85 33.1
CDY33629 Canola golgi, vacuole 25.05 32.62
CDX99401 Canola peroxisome 33.58 27.69
CDY03253 Canola peroxisome 37.57 13.42
CDX78913 Canola cytosol 0.18 0.56
Protein Annotations
Gene3D:3.30.300.30Gene3D:3.40.50.12780MapMan:7.8.1.1MapMan:9.2.1.3GO:A0A078DEZ1InterPro:AMP-bd_C
InterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigEnsemblPlants:CDX87831ProteinID:CDX87831ProteinID:CDX87831.1GO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152EnsemblPlantsGene:GSBRNA2T00146990001PFAM:PF00501PFAM:PF13193
ScanProsite:PS00455PANTHER:PTHR24096PANTHER:PTHR24096:SF207SUPFAM:SSF56801UniParc:UPI0001B83744SEG:seg
Description
BnaC06g08930D
Coordinates
chrLK031852:-:434029..436971
Molecular Weight (calculated)
59974.6 Da
IEP (calculated)
5.392
GRAVY (calculated)
0.007
Length
551 amino acids
Sequence
(BLAST)
001: MAPQEDAMQK QSSNKSDVIF RSKLPDIYIP NHLPLHDYIF QNISEFASKP CLINGPTGHV YTYSEVHVAS RRIAAGFQKL GVNQNDVVMI LLSNCPEFVL
101: SFLAASFRGA TATAANPFFT PAEIAKQAKA SNSKLIVTES RYVDKIKDLQ NDGVIIVCTD EEPSPIPEGC LRFTELTQST EIETVEISSD DVVALPYSSG
201: TTGLPKGVML THKGLVTSVA QQVDGDNPNL YFHSDDVILC VLPMFHIYAL NSIMLCGLRV GASILIMPKF EINLLLELIQ RCKVTVAPMV PPIVLAMAKS
301: PETEKYDLSS IRVVKSGAAP LGKELEDAVS AKFPNAKLGQ GYGMTEAGPV LAMSLGFAKE PFPVKSGACG TVVRNAEMKI IDPDTGDSLS KNKPGEICIR
401: GHQIMKGYLN NPAATSETID KDGWLHTGDI GLIDDDDELF IVDRLKELIK YKGFQVAPAE LEALLIGHQD ITDVAVVAMK EEAAGEVPVA FVVKSKDSEL
501: SEDDVKQFVA KQVVFYKRIN KVFFVESIPK APSGKILRKD LRAKLANGLV N
Best Arabidopsis Sequence Match ( AT1G51680.1 )
(BLAST)
001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L
Arabidopsis Description
4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.