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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78913 Canola cytosol 26.35 98.32
Bra013369.1-P Field mustard peroxisome, plastid 70.36 82.02
CDX78914 Canola peroxisome, plastid 70.36 81.88
AT4G19010.1 Thale cress peroxisome, plastid 63.77 75.27
GSMUA_Achr11P... Banana peroxisome, plasma membrane 29.19 57.35
KRH74284 Soybean peroxisome 43.56 52.62
PGSC0003DMT400024014 Potato peroxisome 44.76 52.09
VIT_02s0109g00250.t01 Wine grape peroxisome, plastid 44.46 52.01
Solyc08g076300.2.1 Tomato peroxisome 44.46 51.74
KXG38810 Sorghum peroxisome 41.47 48.34
TraesCS1D01G200200.1 Wheat peroxisome 40.72 47.89
GSMUA_Achr11P... Banana peroxisome 38.77 47.61
TraesCS1A01G196700.1 Wheat peroxisome 40.42 47.54
CDY45731 Canola peroxisome 10.93 47.4
Os10t0578950-00 Rice peroxisome 39.52 47.31
TraesCS1B01G211300.1 Wheat peroxisome 40.42 46.0
CDY53918 Canola peroxisome 12.87 45.99
Os08t0143300-00 Rice peroxisome, plastid 40.57 45.85
KRH39635 Soybean cytosol, golgi, peroxisome 33.83 45.38
CDY32418 Canola peroxisome 12.28 44.81
Zm00001d030132_P002 Maize peroxisome 41.17 43.24
HORVU1Hr1G051190.2 Barley peroxisome 40.27 42.3
CDY71478 Canola vacuole 28.44 41.39
CDY45730 Canola vacuole 27.99 40.74
CDX96636 Canola golgi, vacuole 22.75 39.69
CDY33631 Canola plastid 31.29 37.79
CDY31472 Canola peroxisome 29.04 37.74
CDX96633 Canola plastid 31.14 37.61
CDY31883 Canola plastid 30.54 37.57
CDY29527 Canola peroxisome 29.64 37.36
CDY01369 Canola plastid 30.09 37.02
CDY39153 Canola peroxisome 29.64 36.73
CDY46376 Canola peroxisome 29.64 36.73
CDY39155 Canola peroxisome 29.79 36.72
CDY46375 Canola peroxisome 29.64 36.53
CDX96638 Canola peroxisome 28.74 36.43
CDY33628 Canola plastid 29.49 35.69
CDY01370 Canola peroxisome, plastid 29.19 35.45
CDX96637 Canola plastid 29.34 35.44
CDY33627 Canola peroxisome 29.19 35.01
CDY48875 Canola mitochondrion, plastid, vacuole 23.2 34.91
CDY33629 Canola golgi, vacuole 21.71 34.28
CDY43921 Canola peroxisome 27.84 33.76
CDX87831 Canola peroxisome 27.69 33.58
CDY19568 Canola peroxisome 27.25 32.97
CDY07442 Canola peroxisome 27.1 32.55
CDY39293 Canola peroxisome 26.95 32.32
CDX82208 Canola peroxisome 27.54 32.17
CDY32416 Canola peroxisome 27.4 31.88
CDY31474 Canola peroxisome 27.54 31.72
CDY39816 Canola peroxisome 25.45 31.48
CDY06431 Canola peroxisome 25.9 31.28
CDY68920 Canola peroxisome 25.75 31.1
CDY19570 Canola peroxisome 25.45 30.41
CDY06435 Canola vacuole 18.41 27.64
CDY65966 Canola peroxisome 11.83 22.38
CDY71190 Canola peroxisome 12.13 21.89
CDY03253 Canola peroxisome 25.3 10.95
Protein Annotations
Gene3D:1.10.10.10Gene3D:1.10.10.570MapMan:22.5.4.2.2Gene3D:3.30.300.30Gene3D:3.40.50.12780GO:A0A078EE39
InterPro:AMP-bd_CInterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigEnsemblPlants:CDX99401ProteinID:CDX99401ProteinID:CDX99401.1
InterPro:ESCRT-II_cplx_Vps25-subInterPro:ESCRT-II_cplx_Vps25-sub_NGO:GO:0000814GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005768GO:GO:0005777GO:GO:0006744
GO:GO:0006810GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020
GO:GO:0016405GO:GO:0071985EnsemblPlantsGene:GSBRNA2T00107726001InterPro:IPR014041InterPro:IPR036388PFAM:PF00501
PFAM:PF05871PFAM:PF13193ScanProsite:PS00455PANTHER:PTHR24096PANTHER:PTHR24096:SF261SUPFAM:SSF46785
SUPFAM:SSF56801TMHMM:TMhelixUniParc:UPI0004EEF435InterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sf:
Description
BnaC01g11510D
Coordinates
chrLK031910:+:459568..467078
Molecular Weight (calculated)
74111.3 Da
IEP (calculated)
7.998
GRAVY (calculated)
0.052
Length
668 amino acids
Sequence
(BLAST)
001: MVESIAAAIH RDLGVRQGDV VSLVLPNSLY FPLLFLSLIS LGTVVTTMNP SSSLGEIKKQ VSECNVALAF TSRESVAKLA SLGVVVIRVP ESYDLDSVRV
101: ENPKFYSIIK GGFDFGSVTK PLVKQDDVAA IMYSSGTTGA SKGVMLTHRN LIASMELFVR FEASQYEHPG SSNVYLAALP LCHIYGLSLF VMGLLSVGST
201: IVVMRRFDVS DVVDVIERFK ITHFPVVPPM LMALTKKAKG VCGEAFRSLK QVSSGAAPLS RKFIEDFVGT LPHVDLIQGY GMTESTAVGT RGFNTQKLRK
301: YSSVGLLAPN MQARVVDWSS GSFLPPGNRG ELWIQGPGVM KGYLNNPEAT EMTIVEKSWL RTGDIAYFGE DGYLFIVDRM KEIIKYKGFQ IAPADLEAVL
401: VSHPLIIDAA VTAAPNEECG EIPVAFVVRR QETALSEQDV INYVAAQVAP YRKVRKVVMV SSIPKSPTGK ILRKELKRIL TNCICEGQRM QKLGDFKLPQ
501: FFNYPPYFTL QPVRDTREKQ IQLWKELILD FCKSQKVFLI GVEEDFPLFS NSAIDRTLSH EARETFLSAF VGEGRAEWLD KGHRKCLILW HRIQDWADII
601: LKFVRENGLE DSVMTVEEIR SGTESLGTEL EGIDRTILMR ALKLLENKGK LALFKGTSAD DEGVKFSV
Best Arabidopsis Sequence Match ( AT4G19010.1 )
(BLAST)
001: MAATHLHIPP NPKTQTSHQN PPFWFSSKTG IYTSKFPSLH LPVDPNLDAV SALFSHKHHG DTALIDSLTG FSISHTELQI MVQSMAAGIY HVLGVRQGDV
101: VSLVLPNSVY FPMIFLSLIS LGAIVTTMNP SSSLGEIKKQ VSECSVGLAF TSTENVEKLS SLGVSVISVS ESYDFDSIRI ENPKFYSIMK ESFGFVPKPL
201: IKQDDVAAIM YSSGTTGASK GVLLTHRNLI ASMELFVRFE ASQYEYPGSS NVYLAALPLC HIYGLSLFVM GLLSLGSTIV VMKRFDASDV VNVIERFKIT
301: HFPVVPPMLM ALTKKAKGVC GEVFKSLKQV SSGAAPLSRK FIEDFLQTLP HVDLIQGYGM TESTAVGTRG FNSEKLSRYS SVGLLAPNMQ AKVVDWSSGS
401: FLPPGNRGEL WIQGPGVMKG YLNNPKATQM SIVEDSWLRT GDIAYFDEDG YLFIVDRIKE IIKYKGFQIA PADLEAVLVS HPLIIDAAVT AAPNEECGEI
501: PVAFVVRRQE TTLSEEDVIS YVASQVAPYR KVRKVVMVNS IPKSPTGKIL RKELKRILTN SVSSRL
Arabidopsis Description
4CLL64-coumarate--CoA ligase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q84P24]
SUBAcon: [peroxisome,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.