Factsheet for Zm00001d030132_P002

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38810	Sorghum	peroxisome	83.18	92.32
TraesCS1D01G200200.1	Wheat	peroxisome	65.57	73.42
TraesCS1A01G196700.1	Wheat	peroxisome	64.78	72.54
Os10t0578950-00	Rice	peroxisome	62.26	70.97
TraesCS1B01G211300.1	Wheat	peroxisome	64.78	70.19
Os08t0143300-00	Rice	peroxisome, plastid	62.42	67.17
GSMUA_Achr11P...	Banana	peroxisome, plasma membrane	34.91	65.29
HORVU1Hr1G051190.2	Barley	peroxisome	65.25	65.25
GSMUA_Achr11P...	Banana	peroxisome	48.58	56.8
KRH74284	Soybean	peroxisome	47.8	54.97
Bra013369.1-P	Field mustard	peroxisome, plastid	47.17	52.36
AT4G19010.1	Thale cress	peroxisome, plastid	46.23	51.94
Solyc08g076300.2.1	Tomato	peroxisome	45.91	50.87
PGSC0003DMT400024014	Potato	peroxisome	45.91	50.87
VIT_02s0109g00250.t01	Wine grape	peroxisome, plastid	45.6	50.79
KRH39635	Soybean	cytosol, golgi, peroxisome	37.58	47.99
Zm00001d027519_P001	Maize	plasma membrane	36.48	42.11
Zm00001d033055_P001	Maize	peroxisome	35.85	41.45
CDX99401	Canola	peroxisome	43.24	41.17
Zm00001d027711_P003	Maize	extracellular	34.28	39.28
Zm00001d018660_P001	Maize	peroxisome	33.49	37.83
Zm00001d032103_P001	Maize	peroxisome	32.08	36.76
Zm00001d019957_P002	Maize	peroxisome	32.39	36.2
Zm00001d050224_P002	Maize	peroxisome	31.76	36.07
Zm00001d015459_P003	Maize	peroxisome	31.29	33.9
Zm00001d012144_P001	Maize	plastid	21.54	33.41
Zm00001d003702_P001	Maize	plastid	30.19	31.48
Zm00001d046915_P001	Maize	extracellular	31.6	31.46
Zm00001d051529_P001	Maize	peroxisome, plasma membrane	29.56	29.65
Zm00001d039274_P003	Maize	peroxisome	30.35	19.15

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	UniProt:A0A1D6KA74	InterPro:AMP-bd_C	InterPro:AMP-dep_Synth/Lig
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0006744	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016405	GO:GO:0016874	ProteinID:ONM00377.1	PFAM:PF00501
PFAM:PF13193	PANTHER:PTHR24096	PANTHER:PTHR24096:SF261	SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI000844EB45
EnsemblPlantsGene:Zm00001d030132	EnsemblPlants:Zm00001d030132_P002	EnsemblPlants:Zm00001d030132_T002	SEG:seg	:	:

Description

4-coumarate--CoA ligase-like 6

Coordinates

chr1:-:108199942..108209147

Molecular Weight (calculated)

67952.7 Da

IEP (calculated)

9.376

GRAVY (calculated)

0.223

Length

636 amino acids

Sequence
(BLAST)

001: MQDAVATHGP ANAAAGATFY CAAAGVYAST HPPVALPSDP SLSLVPHIFA RLPAARPDAP ALVDAATAEA LSRADLRRLV SALAAGLRRR RGLREGDVVL
101: LALPNSIAFP VAFLAVLAAG SIATTMSPFS APAEIAARVR DTSPALVFAT LDNVGKLPPL RVPVVLVPDA FHLADEGAPE FAPFRELLLL DSEPLPGPSV
201: GQDDAAAILY SSGTGGRSKG VVLTHRNLIA TVELFVHFEA SQYAAPACDN VYLAALPMFH VYGLSLFAVG LLSLGSTVVV MKRFDAGEAV KTIRRFKVTH
301: FPVVPPIMAA LVHTTKPAAM PLECLVQVST GAAPSSRRLI DDFVKAFPHV DLIQLMIAEK YLSRLVLPNG LARLQLFRKG TIKSLRGSVF NYQSITSVLK
401: IKDESRLWIQ VGYHRGYGMT ESAAVGTRGF NTSKHKKYGS VGLLAPNMHA RIVHVETGCS LPPGSCGELW LHGPAIMKGY LNHVDPCAIN GGWLRTGDIA
501: YFDFDGYLYI VGRLKEVIKY KGFQIAPADL EAVLIEHPGI VDVAVTSTED EEAGEVPVAF VVRKSGSGLS CTQVMEYVAK QVSPYKKVRK VVFVESIPKS
601: PAGKVLRRLL RESLAASAVA GPTSYSESNS MRHSRL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.