CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

cytosol 2
peroxisome 4
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74284	Soybean	peroxisome	80.92	72.88
VIT_02s0109g00250.t01	Wine grape	peroxisome, plastid	53.82	46.94
PGSC0003DMT400024014	Potato	peroxisome	53.61	46.52
Solyc08g076300.2.1	Tomato	peroxisome	52.81	45.82
GSMUA_Achr11P...	Banana	peroxisome, plasma membrane	30.52	44.71
AT4G19010.1	Thale cress	peroxisome, plastid	50.2	44.17
Bra013369.1-P	Field mustard	peroxisome, plastid	50.0	43.46
Os10t0578950-00	Rice	peroxisome	47.99	42.83
TraesCS1D01G200200.1	Wheat	peroxisome	48.8	42.78
KRH63132	Soybean	vacuole	24.3	42.46
TraesCS1A01G196700.1	Wheat	peroxisome	48.39	42.43
GSMUA_Achr11P...	Banana	peroxisome	45.98	42.1
KXG38810	Sorghum	peroxisome	48.39	42.06
TraesCS1B01G211300.1	Wheat	peroxisome	48.8	41.4
Os08t0143300-00	Rice	peroxisome, plastid	48.8	41.12
HORVU1Hr1G051190.2	Barley	peroxisome	49.6	38.84
Zm00001d030132_P002	Maize	peroxisome	47.99	37.58
KRG92119	Soybean	peroxisome	39.56	34.62
KRH34672	Soybean	peroxisome	39.56	34.56
KRH17509	Soybean	peroxisome, plastid	37.55	34.06
KRH34673	Soybean	peroxisome	38.96	34.04
CDX99401	Canola	peroxisome	45.38	33.83
KRG92118	Soybean	peroxisome	10.64	33.12
KRH25085	Soybean	peroxisome	20.28	33.11
KRH22842	Soybean	peroxisome, plastid	34.94	32.22
KRH30593	Soybean	peroxisome	35.34	31.54
KRG94318	Soybean	peroxisome, plastid	32.53	29.94
KRH09616	Soybean	mitochondrion, peroxisome	31.73	29.37
KRH63739	Soybean	peroxisome, plastid	34.14	29.31
KRH57646	Soybean	peroxisome, plastid	32.13	28.99
KRH54211	Soybean	peroxisome	34.34	28.64
KRH23700	Soybean	peroxisome	31.33	28.52
KRH02885	Soybean	peroxisome	30.32	28.17
KRH29003	Soybean	plastid	31.53	27.84
KRH77759	Soybean	peroxisome	30.72	27.57
KRH02884	Soybean	peroxisome	30.12	27.42
KRH02886	Soybean	peroxisome, plastid	30.12	26.6
KRG98485	Soybean	peroxisome	28.51	25.68
KRH46374	Soybean	peroxisome	28.51	25.68
KRH27719	Soybean	peroxisome	27.11	25.05
KRH19011	Soybean	peroxisome	27.31	24.2
KRG94321	Soybean	cytosol, golgi, peroxisome	12.85	20.32
KRH57649	Soybean	plastid	10.84	19.29

Protein Annotations

Gene3D:3.30.300.310	Gene3D:3.40.50.12780	MapMan:35.1	EMBL:ACUP02005947	InterPro:AMP-bd_C	InterPro:AMP-dep_Synth/Lig
EnsemblPlantsGene:GLYMA_09G211100	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	UniProt:K7LF62	EnsemblPlants:KRH39635	ProteinID:KRH39635	ProteinID:KRH39635.1
PFAM:PF00501	PFAM:PF13193	PANTHER:PTHR24096	PANTHER:PTHR24096:SF261	SUPFAM:SSF56801	TMHMM:TMhelix
UniParc:UPI0002964902	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:43503806..43508238

Molecular Weight (calculated)

54029.9 Da

IEP (calculated)

7.644

GRAVY (calculated)

0.216

Length

498 amino acids

Sequence
(BLAST)

001: MAANINCHMP LNHHPHCFSP KTGIYHSKHS PVDLPNDPFL DLLLPLVKSL ASGLHRIGVS PGDVVLLLLP NSIYYPIVFL AVLYLGAVFT PLNSLSGVCE
101: IRRQKLEPLG ISVIAVPENG KGLKDGCFSC FCDLISCDFD LPKRPAIKQD DTAGILYSSG TTAVSKGASQ YGLSCLRNVY RAVWPMFHVN VLSLFAVGLL
201: SLGSTVVVMM KFDIDEVVRV IDEYKVIHFP VVPPMLTALI TRANGVNGGE SLVQVSSGAA PLSTGVINEF IRAFPNVDFI QGMTESTAVG TRGFNTEKFL
301: NYSSIGLLAP NMEAKVVDWN TGAFLPPGSS GELWLRGPSI MTGYLNNEEA TMSTIDKDGE SVGSKFKPHP LSPPLCWFGF FLGQQINTFR SWQKCTLFGT
401: IPVCTYKCNN IAPANLDAVL SLHPEIVDVA VTGAMDEETG EMPAALVVRK VGSVLSPKRI MDFVAELVRK VFFTDKIPRS ATGKILRKQL SNCSTSKL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.