CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 3
vacuole 1
mitochondrion 3
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25085	Soybean	peroxisome	43.89	77.7
KRH30593	Soybean	peroxisome	71.85	69.53
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	28.89	68.42
VIT_06s0061g00450.t01	Wine grape	peroxisome	67.78	67.28
Solyc11g069050.1.1	Tomato	peroxisome	66.3	66.54
PGSC0003DMT400020978	Potato	peroxisome	65.93	65.8
GSMUA_Achr5P19650_001	Banana	peroxisome	53.89	59.88
GSMUA_Achr8P14210_001	Banana	peroxisome	54.26	59.07
TraesCS4D01G268400.1	Wheat	peroxisome	58.52	57.77
KXG40154	Sorghum	peroxisome	59.07	57.69
TraesCS4B01G269200.1	Wheat	peroxisome	59.07	57.48
Zm00001d027711_P003	Maize	extracellular	58.89	57.3
Os03t0152400-01	Rice	plasma membrane	58.52	57.25
TraesCS4A01G036200.1	Wheat	peroxisome	58.15	57.19
Zm00001d033055_P001	Maize	peroxisome	57.78	56.73
OQU91476	Sorghum	peroxisome	57.78	56.01
KRH63132	Soybean	vacuole	24.07	45.61
KRH02885	Soybean	peroxisome	42.04	42.35
KRH17509	Soybean	peroxisome, plastid	42.04	41.35
KRH23700	Soybean	peroxisome	41.85	41.32
KRG92118	Soybean	peroxisome	12.22	41.25
KRH02884	Soybean	peroxisome	41.67	41.13
KRH77759	Soybean	peroxisome	42.22	41.08
KRH09616	Soybean	mitochondrion, peroxisome	40.93	41.08
KRH34672	Soybean	peroxisome	42.78	40.53
KRG92119	Soybean	peroxisome	42.59	40.42
KRH74284	Soybean	peroxisome	40.93	39.96
KRH29003	Soybean	plastid	41.67	39.89
KRH02886	Soybean	peroxisome, plastid	41.67	39.89
KRH27719	Soybean	peroxisome	39.81	39.89
KRG94318	Soybean	peroxisome, plastid	39.81	39.74
KRH34673	Soybean	peroxisome	41.85	39.65
KRH57646	Soybean	peroxisome, plastid	39.63	38.77
KRH63739	Soybean	peroxisome, plastid	40.0	37.24
KRH19011	Soybean	peroxisome	38.7	37.19
KRH54211	Soybean	peroxisome	39.63	35.85
KRG98485	Soybean	peroxisome	36.3	35.44
KRH46374	Soybean	peroxisome	36.11	35.26
KRH39635	Soybean	cytosol, golgi, peroxisome	32.22	34.94
HORVU4Hr1G072150.1	Barley	peroxisome	34.81	33.75
KRG94321	Soybean	cytosol, golgi, peroxisome	15.19	26.03
KRH57649	Soybean	plastid	12.96	25.0

Protein Annotations

EntrezGene:100797843	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	EMBL:ACUP02008437	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ncoils:Coil	EnsemblPlantsGene:GLYMA_13G323000	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016874	UniProt:H2BER4	EMBL:HQ896929	EnsemblPlants:KRH22842
ProteinID:KRH22842	ProteinID:KRH22842.1	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096
PANTHER:PTHR24096:SF310	SUPFAM:SSF56801	UniParc:UPI000233AB01	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:41740800..41746265

Molecular Weight (calculated)

58694.7 Da

IEP (calculated)

9.297

GRAVY (calculated)

0.162

Length

540 amino acids

Sequence
(BLAST)

001: MQRSGYGSDG IYRSLRPSIV FPKNSNLSLV SHLFNRVAAF PSKPALIDAD SSETLSFAEL KLLTVRVAHG LLRLGVTKND VVLFLAPNDI RYIVCFLAVA
101: SLGAAVTTVN PAYTAAEVSK QANDSKPKLL VTVAELWDKL EHLKLPAVFL RCSNAPHAPS SATSFDALVQ LAGSVTEFPE IKIKQSDTAA LLYSSGTTGL
201: SKGVVLTHGN FVAASLMIGF DDDLAGVLHS VFLCVLPMFH VFGLMVISYG QLQRGSAVVS LKKFEFELVL KTIEKFKVTH LWVVPPIILA LAKHGLVDKY
301: DLSSLKHIGS GAAPLGKELM KECAKRFPHA IVSQGYGMTE TCGIVSVENA RMGIRNSGST GMLVAGMEAQ VVSVDTLKPL PPGQLGEIWV RGPNMMQGYH
401: NNPQATRLTM DKKGWVHTGD LGYFDEDGQL FVVDRIKELI KYKGFQVAPA ELEGLLVSHA EILDAVVIPY PDAEAGEVPV AYVVRSPNSS LTEEDVQKFI
501: AKQVAPFKRI RRVTFINAVP KTASGKILRR ELIEKVRSKI

Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)

001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM

Arabidopsis Description

4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.