CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
plastid 1
peroxisome 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34672	Soybean	peroxisome	93.85	93.68
KRH63132	Soybean	vacuole	44.82	89.47
KRH34673	Soybean	peroxisome	86.47	86.32
KRG92118	Soybean	peroxisome	23.9	85.0
VIT_13s0019g05260.t01	Wine grape	peroxisome	63.09	69.57
Solyc11g007970.1.1	Tomato	peroxisome	62.57	63.01
GSMUA_AchrUn_...	Banana	peroxisome	43.76	50.71
KRH25085	Soybean	peroxisome	25.31	47.21
KRH17509	Soybean	peroxisome, plastid	44.29	45.9
KRH30593	Soybean	peroxisome	42.18	43.01
KRH74284	Soybean	peroxisome	41.65	42.86
KRH22842	Soybean	peroxisome, plastid	40.42	42.59
KRG94318	Soybean	peroxisome, plastid	39.89	41.96
KRH57646	Soybean	peroxisome, plastid	39.89	41.12
KRH63739	Soybean	peroxisome, plastid	41.65	40.86
KRH39635	Soybean	cytosol, golgi, peroxisome	34.62	39.56
KRH54211	Soybean	peroxisome	41.12	39.2
KRH09616	Soybean	mitochondrion, peroxisome	35.5	37.55
KRH77759	Soybean	peroxisome	36.03	36.94
KRH02885	Soybean	peroxisome	34.62	36.75
KRH23700	Soybean	peroxisome	35.33	36.75
KRH27719	Soybean	peroxisome	34.27	36.18
KRH46374	Soybean	peroxisome	34.62	35.62
KRG98485	Soybean	peroxisome	34.62	35.62
KRH29003	Soybean	plastid	34.97	35.28
KRH02884	Soybean	peroxisome	33.74	35.1
KRH02886	Soybean	peroxisome, plastid	34.27	34.57
KRH19011	Soybean	peroxisome	31.81	32.21
KRG94321	Soybean	cytosol, golgi, peroxisome	15.64	28.25
KRH57649	Soybean	plastid	13.88	28.21

Protein Annotations

EntrezGene:100796728	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	EMBL:ACUP02012730	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:GLYMA_20G192100	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	UniProt:I1NHS0	EnsemblPlants:KRG92119
ProteinID:KRG92119	ProteinID:KRG92119.1	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096
PANTHER:PTHR24096:SF213	SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI000233DBCC	SEG:seg	:

Description

hypothetical protein

Coordinates

chr20:-:43072742..43075115

Molecular Weight (calculated)

61657.6 Da

IEP (calculated)

7.367

GRAVY (calculated)

0.064

Length

569 amino acids

Sequence
(BLAST)

001: MSGEQILSSN EEYNKSQPPF GSKSGYDSRT GIYHSLIKLV TKHEIPTRPD LNTANFVLSQ FPQTHLAEAR IAFIDSGTSR SVSYGELKRS IYSLASALFH
101: GLEIRKGDVV FVLSPNSTLY SAICLAVLSV GAVLTTANPI NTATEIAKQV HDSGAKLAIS APEELHKLVP TGVPIILTSR PSDGNMLSVE ELIEGCCTSP
201: ELPQVPVAQS DTAAILYSSG TTGVSKGVVL THANLISIMR LLFWSADVSG SQDDVFLAFI PMFHIYGLVF FGLGLLCVGV TTILMQKYDF QGMLDAIQKH
301: KVNNIAAVPP VILALVKQAK KTRCDLSSLR RVGSGAAPLS KEVAQEFRRM FPWVELRQGY GLTESSGGAT FFPSDKDAKA HPDSCGKLIP TFCAKVVDIE
401: TGKPLPPHKE GELWFKSPTI MKGYLGNLEA TSATIDSEGW LKTGDLGYID EKGFVYIVER IKELIKHNGY QVAPAELESV LLSHPLIVDA AVIPVEDEET
501: GQIPMAYVVR AAGSELSENQ VIQFVAGQVA PYKKVRKVSF IVTIPKSAAG KILRKDLVSQ SKYQLVSKL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.