CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
plastid 1
mitochondrion 1
peroxisome 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25085	Soybean	peroxisome	51.61	94.43
KRH22842	Soybean	peroxisome, plastid	69.53	71.85
CDY39155	Canola	peroxisome	67.38	69.37
AT4G05160.1	Thale cress	peroxisome	67.56	69.3
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	28.32	69.3
Bra029561.1-P	Field mustard	peroxisome	67.2	69.19
CDY46375	Canola	peroxisome	67.2	69.19
VIT_06s0061g00450.t01	Wine grape	peroxisome	65.95	67.65
CDY46376	Canola	peroxisome	64.87	67.16
CDY39153	Canola	peroxisome	63.8	66.05
PGSC0003DMT400020978	Potato	peroxisome	63.62	65.62
Solyc11g069050.1.1	Tomato	peroxisome	63.26	65.61
Bra029560.1-P	Field mustard	peroxisome	58.24	60.86
GSMUA_Achr5P19650_001	Banana	peroxisome	51.61	59.26
KXG40154	Sorghum	peroxisome	58.24	58.77
TraesCS4A01G036200.1	Wheat	peroxisome	57.35	58.29
TraesCS4D01G268400.1	Wheat	peroxisome	56.99	58.14
TraesCS4B01G269200.1	Wheat	peroxisome	57.35	57.66
Zm00001d027711_P003	Maize	extracellular	57.17	57.48
GSMUA_Achr8P14210_001	Banana	peroxisome	51.08	57.46
Zm00001d033055_P001	Maize	peroxisome	56.09	56.91
Os03t0152400-01	Rice	plasma membrane	56.27	56.88
OQU91476	Sorghum	peroxisome	56.09	56.19
KRH63132	Soybean	vacuole	23.48	45.96
KRG92118	Soybean	peroxisome	12.37	43.12
KRG92119	Soybean	peroxisome	43.01	42.18
KRG94318	Soybean	peroxisome, plastid	40.86	42.14
KRH17509	Soybean	peroxisome, plastid	40.68	41.35
KRH74284	Soybean	peroxisome	40.68	41.05
KRH02885	Soybean	peroxisome	39.25	40.86
KRH77759	Soybean	peroxisome	40.5	40.72
KRH34672	Soybean	peroxisome	41.58	40.7
KRH02884	Soybean	peroxisome	39.78	40.59
KRH34673	Soybean	peroxisome	41.22	40.35
KRH27719	Soybean	peroxisome	38.53	39.89
KRH09616	Soybean	mitochondrion, peroxisome	38.35	39.78
KRH23700	Soybean	peroxisome	38.89	39.67
KRH57646	Soybean	peroxisome, plastid	39.07	39.49
KRH29003	Soybean	plastid	39.61	39.18
KRH02886	Soybean	peroxisome, plastid	39.25	38.83
KRH63739	Soybean	peroxisome, plastid	38.89	37.41
KRH54211	Soybean	peroxisome	39.07	36.52
KRH19011	Soybean	peroxisome	36.74	36.48
KRG98485	Soybean	peroxisome	35.84	36.17
HORVU4Hr1G072150.1	Barley	peroxisome	36.02	36.09
KRH46374	Soybean	peroxisome	35.48	35.8
KRH39635	Soybean	cytosol, golgi, peroxisome	31.54	35.34
KRG94321	Soybean	cytosol, golgi, peroxisome	15.05	26.67
KRH57649	Soybean	plastid	12.72	25.36

Protein Annotations

EntrezGene:100808944	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	UniProt:A0A0R0HJB4	EMBL:ACUP02007038
InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:GLYMA_11G194500	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	EnsemblPlants:KRH30593	ProteinID:KRH30593	ProteinID:KRH30593.1	PFAM:PF00501
PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF310	SUPFAM:SSF56801	UniParc:UPI0003DE95EE
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:26790441..26796536

Molecular Weight (calculated)

60556.5 Da

IEP (calculated)

7.324

GRAVY (calculated)

0.044

Length

558 amino acids

Sequence
(BLAST)

001: MGVNKQTSFP MQKAGYGGDG IYRSLRPCLV LPNDPNLSLV SFLFQSVSSF PSKIALVDSH SSQTLTLAHL KSQVAKLAHG FLKLGINKND VVLLLAPNSI
101: HYPICFLAAT AIGAVVSTAN PIYTVNEISK QVDDSNPKLL ITVPELWDKV KNLNLPAVII DTETAQGLVS FEAGNEVSRI TSLDAVMEMA GPATELPESG
201: VKQGDTAALL YSSGTTGLSK GVVLTHRNFI AASVMIGMDD DLAGEQDDVY LCVLPMFHVF GLAVVTYAAL RRGSAVVVME RFELEALLKA IEKQRVTKLW
301: VVPPILLGLA KQSVVGNYDL SSLRRIGSGA APLGKDLMEE CGRRFPHVAI CQGYGMTETC GIVSVENPRV GVRHTGSTGT LVSGVEAQIV SVDTQKPLPP
401: RQLGEIWVRG PNMMQGYHNN PEATRLTIDK KGWVHTGDLG YFDEDGQLYV VDRIKELIKY KGFQVAPAEL EGLLVSHPEI LEAVVVPYPD DEAGEVPIAY
501: VVRSPNSSLT EEEIQKFIAK QVAPFKKLRR VTFINNVPKT ASGKILRREL TAKARSKI

Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)

001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM

Arabidopsis Description

4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.