CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39153	Canola	peroxisome	97.03	97.03
Bra029560.1-P	Field mustard	peroxisome	89.61	90.45
CDY39155	Canola	peroxisome	83.49	83.03
CDY46375	Canola	peroxisome	83.3	82.84
KRH25085	Soybean	peroxisome	39.15	69.18
PGSC0003DMT400020978	Potato	peroxisome	68.83	68.58
Solyc11g069050.1.1	Tomato	peroxisome	67.35	67.47
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	27.46	64.91
KRH30593	Soybean	peroxisome	67.16	64.87
VIT_06s0061g00450.t01	Wine grape	peroxisome	65.31	64.71
GSMUA_Achr5P19650_001	Banana	peroxisome	53.99	59.88
GSMUA_Achr8P14210_001	Banana	peroxisome	54.55	59.27
KXG40154	Sorghum	peroxisome	58.07	56.6
TraesCS4D01G268400.1	Wheat	peroxisome	57.33	56.49
TraesCS4A01G036200.1	Wheat	peroxisome	56.59	55.56
Zm00001d027711_P003	Maize	extracellular	57.14	55.5
Os03t0152400-01	Rice	plasma membrane	56.77	55.43
TraesCS4B01G269200.1	Wheat	peroxisome	56.59	54.95
Zm00001d033055_P001	Maize	peroxisome	55.84	54.73
OQU91476	Sorghum	peroxisome	55.66	53.86
CDY45731	Canola	peroxisome	14.84	51.95
CDY53918	Canola	peroxisome	16.7	48.13
CDY32418	Canola	peroxisome	15.58	45.9
CDY45730	Canola	vacuole	36.36	42.7
CDX96636	Canola	golgi, vacuole	30.06	42.3
CDY71478	Canola	vacuole	35.81	42.05
CDX96638	Canola	peroxisome	40.07	40.99
CDY31472	Canola	peroxisome	38.78	40.66
CDY07442	Canola	peroxisome	41.56	40.29
CDY29527	Canola	peroxisome	39.52	40.19
CDY33631	Canola	plastid	41.19	40.14
CDX96633	Canola	plastid	41.0	39.96
CDY31883	Canola	plastid	40.26	39.96
CDY39293	Canola	peroxisome	41.19	39.86
CDY33628	Canola	plastid	40.63	39.67
CDY01370	Canola	peroxisome, plastid	40.45	39.64
CDY01369	Canola	plastid	39.89	39.59
CDX96637	Canola	plastid	40.45	39.42
CDY43921	Canola	peroxisome	39.7	38.84
CDX87831	Canola	peroxisome	39.7	38.84
CDY19568	Canola	peroxisome	39.7	38.77
CDX78914	Canola	peroxisome, plastid	40.82	38.33
CDY33629	Canola	golgi, vacuole	29.68	37.83
CDY33627	Canola	peroxisome	38.78	37.52
CDY68920	Canola	peroxisome	38.4	37.43
CDY06431	Canola	peroxisome	38.03	37.07
CDY48875	Canola	mitochondrion, plastid, vacuole	30.43	36.94
CDX82208	Canola	peroxisome	38.78	36.54
CDY31474	Canola	peroxisome	38.96	36.21
CDY32416	Canola	peroxisome	38.22	35.89
CDY19570	Canola	peroxisome	36.18	34.88
CDY39816	Canola	peroxisome	34.32	34.26
HORVU4Hr1G072150.1	Barley	peroxisome	34.32	33.21
CDY06435	Canola	vacuole	24.49	29.66
CDX99401	Canola	peroxisome	36.73	29.64
CDY65966	Canola	peroxisome	18.74	28.61
CDY71190	Canola	peroxisome	18.92	27.57
CDY03253	Canola	peroxisome	34.69	12.12
CDX78913	Canola	cytosol	0.19	0.56

Protein Annotations

EnsemblPlants:CDY46376	EnsemblPlantsGene:GSBRNA2T00083825001	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:A0A078I937	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
PANTHER:PTHR24096	PANTHER:PTHR24096:SF302	PFAM:PF00501	PFAM:PF13193	ProteinID:CDY46376	ProteinID:CDY46376.1
ScanProsite:PS00455	SUPFAM:SSF56801	UniParc:UPI0004EEFA3D	UniProt:A0A078I937	MapMan:35.1	:

Description

BnaA09g19900DBnaA09g19900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I937]

Coordinates

chrLK032664:-:96178..98854

Molecular Weight (calculated)

59070.5 Da

IEP (calculated)

6.629

GRAVY (calculated)

-0.006

Length

539 amino acids

Sequence
(BLAST)

001: MENSGYGRDG IYRSLRPTLV LPEDPNTSLV SFLFANTSSC PSKPALVDSD TGDSLSFSQL KAAVSRLAHG FLRLGIRKND VVMIFAPNSH QFPLCFLAVT
101: AIGGVFTTVN PSYTVNEVSK QVKDCNPKII ISVQELLDKV NTFDLPIVLL GQSDLDSSSK ILTLNNVMDL SEPVSDLPCV VVKQSDTAAL LYSSGTTGMS
201: KGVELTHGNF IATALMVTMD QDLMGEYHGV FLCFLPMFHV FGLSVVTYAQ LQRGNAVVSM AKFDLERLLK NIEKYRVTQL WVVPPVFLAL AKQSIVKKYD
301: LSSLKYIGSG AAPLGKDSME ECARNIPNVV LMQGYAMTET CGIVSMEDPR RGKRNSGSAG TLASGIEAQV VSVESGKPQP PNQQGEIWVR GPNMMKGYLN
401: NPEATKETID ENGWVHTGDL GYFNEDGNLF IVERLKELIK CNGFQVAPAE LEGLLVSHPE LLDAIVIPFP DVYAGEVPIA FVVRSPNTSI TEEDIQKFIA
501: KQVAPYKRLR RVSFVSSVPK SLAGKLLRRE LREQVRSKM

Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)

001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM

Arabidopsis Description

4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.