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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • plastid 1
  • peroxisome 3
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:peroxisome
PProwler:peroxisome
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029561.1-P Field mustard peroxisome 97.05 97.05
CDY46375 Canola peroxisome 96.68 96.68
AT4G05160.1 Thale cress peroxisome 88.93 88.6
CDY46376 Canola peroxisome 83.03 83.49
CDY39153 Canola peroxisome 82.29 82.75
KRH25085 Soybean peroxisome 40.77 72.46
PGSC0003DMT400020978 Potato peroxisome 71.4 71.53
Solyc11g069050.1.1 Tomato peroxisome 70.48 71.0
VIT_06s0061g00450.t01 Wine grape peroxisome 69.19 68.93
HORVU4Hr1G072130.2 Barley mitochondrion, peroxisome 28.6 67.98
KRH30593 Soybean peroxisome 69.37 67.38
GSMUA_Achr5P19650_001 Banana peroxisome 53.14 59.26
GSMUA_Achr8P14210_001 Banana peroxisome 54.06 59.07
KXG40154 Sorghum peroxisome 58.86 57.69
Zm00001d027711_P003 Maize extracellular 58.12 56.76
Os03t0152400-01 Rice plasma membrane 57.75 56.7
TraesCS4D01G268400.1 Wheat peroxisome 56.83 56.31
TraesCS4B01G269200.1 Wheat peroxisome 57.56 56.22
TraesCS4A01G036200.1 Wheat peroxisome 56.83 56.1
Zm00001d033055_P001 Maize peroxisome 56.64 55.82
CDY45731 Canola peroxisome 15.68 55.19
OQU91476 Sorghum peroxisome 56.46 54.94
CDY53918 Canola peroxisome 17.16 49.73
CDY32418 Canola peroxisome 15.68 46.45
CDY45730 Canola vacuole 38.19 45.1
CDY71478 Canola vacuole 37.64 44.44
CDX96636 Canola golgi, vacuole 30.44 43.08
CDY31472 Canola peroxisome 40.77 43.0
CDX96638 Canola peroxisome 41.51 42.69
CDY29527 Canola peroxisome 41.33 42.26
CDY01370 Canola peroxisome, plastid 42.62 42.0
CDY31883 Canola plastid 41.88 41.8
CDY01369 Canola plastid 41.51 41.44
CDY19568 Canola peroxisome 42.07 41.3
CDY33631 Canola plastid 41.88 41.05
CDY43921 Canola peroxisome 41.7 41.02
CDY33628 Canola plastid 41.7 40.94
CDX96633 Canola plastid 41.7 40.87
CDX87831 Canola peroxisome 41.51 40.83
CDX96637 Canola plastid 41.33 40.51
CDY07442 Canola peroxisome 41.14 40.11
CDY33627 Canola peroxisome 40.77 39.68
CDY39293 Canola peroxisome 40.77 39.68
CDX82208 Canola peroxisome 41.33 39.16
CDY68920 Canola peroxisome 39.67 38.88
CDY06431 Canola peroxisome 39.3 38.52
CDY32416 Canola peroxisome 40.77 38.5
CDY31474 Canola peroxisome 41.14 38.45
CDY33629 Canola golgi, vacuole 29.89 38.3
CDY48875 Canola mitochondrion, plastid, vacuole 31.37 38.29
CDX78914 Canola peroxisome, plastid 40.41 38.15
CDY19570 Canola peroxisome 38.38 37.21
CDY39816 Canola peroxisome 35.79 35.93
HORVU4Hr1G072150.1 Barley peroxisome 35.79 34.83
CDY06435 Canola vacuole 25.28 30.79
CDY65966 Canola peroxisome 19.56 30.03
CDY71190 Canola peroxisome 20.48 30.0
CDX99401 Canola peroxisome 36.72 29.79
CDY03253 Canola peroxisome 36.16 12.7
CDX78913 Canola cytosol 0.18 0.56
Protein Annotations
Gene3D:3.30.300.30Gene3D:3.40.50.12780MapMan:35.1GO:A0A078HKZ9UniProt:A0A078HKZ9InterPro:AMP-bd_C
InterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigEnsemblPlants:CDY39155ProteinID:CDY39155ProteinID:CDY39155.1GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00067335001PFAM:PF00501PFAM:PF13193ScanProsite:PS00455PANTHER:PTHR24096PANTHER:PTHR24096:SF302
SUPFAM:SSF56801TMHMM:TMhelixUniParc:UPI0004EB4765SEG:seg::
Description
BnaC09g21890DBnaC09g21890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HKZ9]
Coordinates
chrLK032442:+:10361..12941
Molecular Weight (calculated)
59497.1 Da
IEP (calculated)
8.170
GRAVY (calculated)
-0.013
Length
542 amino acids
Sequence
(BLAST)
001: MEKSGYGRDG IYRSLRPPLV LPKDPNTSLV SFLFRNSSSS YPSKPAIIDS DSGDSLSFSD LKSSVARLAH GFLRLGIRQN DVVLIFAPNS YQFPLCFLAV
101: SAIGAVFTTA NPLYTTNEVS KQIKDSNPKL IISVEQLFDK VKDFNLPVVL LGTCNESLDS NSKILTFKNV MELSDQVSDL PVAAIKQTDT AALLYSSGTT
201: GISKGVELTH GNFIAASLMV TMDQDLMGEY HGVFLCFLPL FHVFGLAVIA YSQLQRGNAL VSMARFELEL LLKNIERYRV TQLWVVPPVF LALAKQSVVK
301: KYDLSSLKYI GSGAAPLGKD LMEECGKNIP SVVLMQGYGM TETCGIVSVE DPRLGKRNSG SAGMLAPGIE AQIVSVESGK PQPPNQQGEI WVRGPNMMKG
401: YFNNPQATKE TIDRKGWVHT GDLGYFNEDG NLFVVDRLKE LIKYKGFQVA PAELEGLLVS HPEILDAVVI PLPDEEAGEV PIAFVVRSPN SSITEEDIQK
501: FIAKQVAPYK RLRRVSFIST VPKSAAGKIL RRELVQQVRS KM
Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)
001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM
Arabidopsis Description
4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.