CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53918	Canola	peroxisome	75.96	74.33
CDY45731	Canola	peroxisome	36.07	42.86
CDY48875	Canola	mitochondrion, plastid, vacuole	89.07	36.71
GSMUA_Achr9P22840_001	Banana	peroxisome	66.12	31.68
CDY19570	Canola	peroxisome	82.51	27.01
CDY06435	Canola	vacuole	65.03	26.74
GSMUA_Achr7P05070_001	Banana	peroxisome	69.95	25.96
CDY06431	Canola	peroxisome	78.14	25.86
GSMUA_Achr4P12590_001	Banana	peroxisome	68.85	25.77
CDX82208	Canola	peroxisome	79.78	25.52
CDY68920	Canola	peroxisome	77.05	25.5
CDY32416	Canola	peroxisome	79.23	25.26
GSMUA_Achr1P23450_001	Banana	peroxisome	69.4	24.42
GSMUA_Achr4P05820_001	Banana	peroxisome	68.31	23.95
GSMUA_AchrUn_...	Banana	peroxisome	67.76	23.94
Os02t0177600-01	Rice	plasma membrane	69.4	22.92
CDY19568	Canola	peroxisome	68.85	22.83
TraesCS6A01G151700.1	Wheat	peroxisome	67.76	22.71
TraesCS6B01G179900.2	Wheat	peroxisome	67.76	22.63
EER90150	Sorghum	peroxisome	68.85	22.62
TraesCS6D01G141700.1	Wheat	peroxisome	67.76	22.59
KRH02886	Soybean	peroxisome, plastid	69.4	22.52
CDX87831	Canola	peroxisome	67.76	22.5
CDY43921	Canola	peroxisome	67.76	22.5
Os08t0448000-01	Rice	peroxisome	66.12	22.45
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	66.67	22.34
EES15085	Sorghum	peroxisome	67.21	22.28
HORVU6Hr1G030390.2	Barley	peroxisome	67.21	22.24
TraesCS2B01G171200.1	Wheat	peroxisome	65.57	22.22
TraesCS2D01G150400.1	Wheat	peroxisome	65.03	22.04
Os06t0656500-01	Rice	peroxisome	67.21	22.0
TraesCS2A01G145800.1	Wheat	peroxisome	65.03	21.96
Zm00001d032103_P001	Maize	peroxisome	66.12	21.8
TraesCS7A01G496200.1	Wheat	peroxisome	66.12	21.72
EES04623	Sorghum	peroxisome	65.57	21.62
TraesCS7D01G483400.1	Wheat	peroxisome	66.12	21.61
Zm00001d015459_P003	Maize	peroxisome	66.12	20.61
Os08t0245200-01	Rice	extracellular	63.39	20.57
Zm00001d050224_P002	Maize	peroxisome	62.84	20.54
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	66.12	20.51
EES13602	Sorghum	peroxisome	62.3	19.96
Zm00001d046915_P001	Maize	extracellular	69.4	19.87
CDY07442	Canola	peroxisome	60.11	19.78
CDY39293	Canola	peroxisome	59.56	19.57
CDX96636	Canola	golgi, vacuole	39.34	18.8
KRH19011	Soybean	peroxisome	56.83	18.51
CDY71478	Canola	vacuole	45.9	18.3
CDY45730	Canola	vacuole	45.9	18.3
CDY39816	Canola	peroxisome	47.54	16.11
CDX96638	Canola	peroxisome	45.9	15.94
CDY31472	Canola	peroxisome	44.26	15.76
CDX96633	Canola	plastid	47.54	15.73
CDY39155	Canola	peroxisome	46.45	15.68
CDY46375	Canola	peroxisome	46.45	15.68
CDY46376	Canola	peroxisome	45.9	15.58
CDY33631	Canola	plastid	46.99	15.55
CDY29527	Canola	peroxisome	44.81	15.47
CDY39153	Canola	peroxisome	44.81	15.21
CDY31883	Canola	plastid	43.72	14.73
CDY01369	Canola	plastid	43.17	14.55
CDX96637	Canola	plastid	43.72	14.47
CDX78914	Canola	peroxisome, plastid	45.36	14.46
CDY01370	Canola	peroxisome, plastid	43.17	14.36
CDY33628	Canola	plastid	43.17	14.31
CDY33627	Canola	peroxisome	42.08	13.82
CDY31474	Canola	peroxisome	43.72	13.79
CDY33629	Canola	golgi, vacuole	31.69	13.71
CDX99401	Canola	peroxisome	44.81	12.28
CDY03253	Canola	peroxisome	47.54	5.64
CDY65966	Canola	peroxisome	8.74	4.53
CDY71190	Canola	peroxisome	4.92	2.43
CDX78913	Canola	cytosol	1.09	1.12

Protein Annotations

EnsemblPlants:CDY32418	EnsemblPlantsGene:GSBRNA2T00052015001	Gene3D:3.30.300.310	Gene3D:3.40.50.12780	GO:A0A078H6I0	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF207	PFAM:PF00501	PFAM:PF13193	ProteinID:CDY32418	ProteinID:CDY32418.1	SEG:seg
SUPFAM:SSF56801	UniParc:UPI0004EF1560	UniProt:A0A078H6I0	MapMan:35.1	:	:

Description

BnaC03g42020DBnaC03g42020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6I0]

Coordinates

chrLK032294:-:252561..253382

Molecular Weight (calculated)

20221.3 Da

IEP (calculated)

4.882

GRAVY (calculated)

-0.118

Length

183 amino acids

Sequence
(BLAST)

001: MTVPHAPDLV FLYKTKSGAC ETVIRNADMK VVDTITGVSL PRNKSGEICI RGDQLMKGYL NDPEATARTI DNDGYVDDDD DIFIVDRLKE LIKFKGYQVA
101: PAELEALLIS HPYIEDAAVV AMQDEVAGEV PVAFVVSSEG SQVVHYKRVN MVFFTDYIPK APSGKILRKD LRSRLANGPM NLS

Best Arabidopsis Sequence Match ( AT1G51680.1 )
(BLAST)

001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L

Arabidopsis Description

4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.