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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82208 Canola peroxisome 98.08 98.43
AT3G21230.1 Thale cress peroxisome 86.24 86.84
CDY53918 Canola peroxisome 27.0 82.89
CDY68920 Canola peroxisome 79.62 82.64
CDY06431 Canola peroxisome 79.44 82.46
CDY48875 Canola mitochondrion, plastid, vacuole 63.24 81.76
CDY19570 Canola peroxisome 79.62 81.75
CDY65966 Canola peroxisome 48.78 79.32
CDY32418 Canola peroxisome 25.26 79.23
CDY71190 Canola peroxisome 48.95 75.95
CDX87831 Canola peroxisome 62.37 64.97
CDY43921 Canola peroxisome 62.2 64.79
CDY19568 Canola peroxisome 62.02 64.49
GSMUA_Achr4P12590_001 Banana peroxisome 54.18 63.6
GSMUA_Achr9P22840_001 Banana peroxisome 41.99 63.09
GSMUA_Achr4P05820_001 Banana peroxisome 56.45 62.07
GSMUA_AchrUn_... Banana peroxisome 55.57 61.58
GSMUA_Achr1P23450_001 Banana peroxisome 55.75 61.54
GSMUA_Achr7P05070_001 Banana peroxisome 52.79 61.46
KRH02886 Soybean peroxisome, plastid 57.32 58.33
Os08t0448000-01 Rice peroxisome 54.53 58.07
EES15085 Sorghum peroxisome 55.75 57.97
Zm00001d032103_P001 Maize peroxisome 55.75 57.66
TraesCS2B01G171200.1 Wheat peroxisome 54.18 57.59
TraesCS2D01G150400.1 Wheat peroxisome 54.01 57.41
TraesCS2A01G145800.1 Wheat peroxisome 54.01 57.2
TraesCS6B01G179900.2 Wheat peroxisome 53.14 55.66
TraesCS6A01G151700.1 Wheat peroxisome 52.79 55.49
TraesCS6D01G141700.1 Wheat peroxisome 52.96 55.37
HORVU6Hr1G030390.2 Barley peroxisome 53.14 55.15
Os02t0177600-01 Rice plasma membrane 53.14 55.05
CDY07442 Canola peroxisome 53.31 55.04
KRH19011 Soybean peroxisome 53.83 54.98
EER90150 Sorghum peroxisome 53.31 54.94
CDY39293 Canola peroxisome 53.14 54.76
Os06t0656500-01 Rice peroxisome 53.31 54.74
EES04623 Sorghum peroxisome 52.79 54.59
TraesCS7A01G496200.1 Wheat peroxisome 52.96 54.58
Os08t0245200-01 Rice extracellular 53.48 54.43
TraesCS7D01G483400.1 Wheat peroxisome 52.96 54.29
Zm00001d050224_P002 Maize peroxisome 52.26 53.57
EES13602 Sorghum peroxisome 52.79 53.06
HORVU7Hr1G111130.3 Barley peroxisome, plastid 52.96 51.53
Zm00001d015459_P003 Maize peroxisome 51.92 50.77
CDY45731 Canola peroxisome 13.24 49.35
Zm00001d046915_P001 Maize extracellular 53.48 48.04
CDY06435 Canola vacuole 35.71 46.07
CDY46375 Canola peroxisome 39.02 41.33
CDY39155 Canola peroxisome 38.5 40.77
CDY46376 Canola peroxisome 35.89 38.22
CDY71478 Canola vacuole 30.49 38.13
CDY45730 Canola vacuole 30.31 37.91
CDY39153 Canola peroxisome 35.37 37.66
HORVU0Hr1G002720.3 Barley mitochondrion, plastid 35.19 37.0
CDX96638 Canola peroxisome 33.45 36.43
CDY31472 Canola peroxisome 32.4 36.19
CDY31883 Canola plastid 34.15 36.1
CDX96636 Canola golgi, vacuole 24.04 36.03
CDY39816 Canola peroxisome 33.8 35.93
CDY01370 Canola peroxisome, plastid 34.32 35.82
CDX96633 Canola plastid 34.49 35.8
CDY33631 Canola plastid 34.32 35.62
CDY29527 Canola peroxisome 32.75 35.47
CDY01369 Canola plastid 33.45 35.36
CDX78914 Canola peroxisome, plastid 34.84 34.84
CDY33628 Canola plastid 32.75 34.06
CDX96637 Canola plastid 32.58 33.82
CDY31474 Canola peroxisome 34.15 33.79
CDY33627 Canola peroxisome 32.58 33.57
CDY33629 Canola golgi, vacuole 23.52 31.91
CDX99401 Canola peroxisome 31.88 27.4
CDY03253 Canola peroxisome 34.15 12.7
CDX78913 Canola cytosol 0.17 0.56
Protein Annotations
Gene3D:3.30.300.30Gene3D:3.40.50.12780MapMan:7.8.1.1MapMan:9.2.1.3GO:A0A078H3L5UniProt:A0A078H3L5
InterPro:AMP-bd_CInterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigEnsemblPlants:CDY32416ProteinID:CDY32416ProteinID:CDY32416.1
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152EnsemblPlantsGene:GSBRNA2T00052011001PFAM:PF00501
PFAM:PF13193ScanProsite:PS00455PANTHER:PTHR24096PANTHER:PTHR24096:SF207SUPFAM:SSF56801UniParc:UPI0004EAD4B1
SEG:seg:::::
Description
BnaC03g42000DBnaC03g42000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3L5]
Coordinates
chrLK032294:-:237113..241542
Molecular Weight (calculated)
63255.6 Da
IEP (calculated)
5.445
GRAVY (calculated)
-0.051
Length
574 amino acids
Sequence
(BLAST)
001: MVLQQQQQTL FVTKKTDQEL PLKTDPEPSR EFIFRSKLPD ISIPNHLPLT DYVFQKFSGD GDGHSTATCL INGATGRIFT YGDVQISLRR IAAGIHRLGI
101: RQRDTVMLLL PNSPEFALSF LAVAYLGAVS TTANPFYTES EIEKQAKASA TKMIITKSCY VDKLTNMKND SVLIVCVEDE NDAVPVANGC VSFKELAQAD
201: ETELPKPEIS PEDTVAMPYS SGTTGLPKGV MITHKGLVTS IAQKVDGENP NVNFTGDDVI LCFLPMFHIY ALDALMLSAM RSGAAILIVP RFELNLVMEL
301: IQRYKVTVVP VAPPVVLAFV KSQETERYDL SSVRMMLSGA ATLKKELEDA VRLKFPNAIF GQGYGMTESG TVAKSLAFAK NPFKTKSGAC GTVIRNAEMK
401: VVDTITGVSL PRNKPGEICI RGDQLMKGYL NDPEATAVTI DKDGWLHTGD IGFVDDDDEV FIVDRLKELI KFKGYQVAPA ELEALLISHT YIEDAAVVAM
501: KDEVADEVPV AYVVRSEGSQ LTEDDVKSYV NKQVVHYKRI KMVFFIEAIP KAVSGKILRK ELRAKLESEY PKQI
Best Arabidopsis Sequence Match ( AT3G21230.1 )
(BLAST)
001: MVLQQQTHFL TKKIDQEDEE EEPSHDFIFR SKLPDIFIPN HLPLTDYVFQ RFSGDGDGDS STTCIIDGAT GRILTYADVQ TNMRRIAAGI HRLGIRHGDV
101: VMLLLPNSPE FALSFLAVAY LGAVSTTANP FYTQPEIAKQ AKASAAKMII TKKCLVDKLT NLKNDGVLIV CLDDDGDNGV VSSSDDGCVS FTELTQADET
201: ELLKPKISPE DTVAMPYSSG TTGLPKGVMI THKGLVTSIA QKVDGENPNL NFTANDVILC FLPMFHIYAL DALMLSAMRT GAALLIVPRF ELNLVMELIQ
301: RYKVTVVPVA PPVVLAFIKS PETERYDLSS VRIMLSGAAT LKKELEDAVR LKFPNAIFGQ GYGMTESGTV AKSLAFAKNP FKTKSGACGT VIRNAEMKVV
401: DTETGISLPR NKSGEICVRG HQLMKGYLND PEATARTIDK DGWLHTGDIG FVDDDDEIFI VDRLKELIKF KGYQVAPAEL EALLISHPSI DDAAVVAMKD
501: EVADEVPVAF VARSQGSQLT EDDVKSYVNK QVVHYKRIKM VFFIEVIPKA VSGKILRKDL RAKLETMCSK
Arabidopsis Description
4CL44-coumarate--CoA ligase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU36]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.