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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:mitochondrion, plastid
MultiLoc:plastid
TargetP:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY53918 Canola peroxisome 23.63 68.98
CDY32418 Canola peroxisome 22.34 66.67
GSMUA_Achr9P22840_001 Banana peroxisome 38.28 54.71
TraesCS2D01G150400.1 Wheat peroxisome 52.75 53.33
TraesCS2B01G171200.1 Wheat peroxisome 52.38 52.96
TraesCS2A01G145800.1 Wheat peroxisome 51.83 52.21
Os08t0448000-01 Rice peroxisome 47.07 47.68
HORVU4Hr1G072130.2 Barley mitochondrion, peroxisome 19.78 47.37
GSMUA_Achr4P12590_001 Banana peroxisome 41.21 46.01
EES15085 Sorghum peroxisome 46.15 45.65
Zm00001d032103_P001 Maize peroxisome 45.6 44.86
GSMUA_Achr4P05820_001 Banana peroxisome 42.67 44.64
GSMUA_Achr7P05070_001 Banana peroxisome 40.29 44.62
GSMUA_Achr1P23450_001 Banana peroxisome 41.58 43.65
CDY48875 Canola mitochondrion, plastid, vacuole 35.35 43.47
GSMUA_AchrUn_... Banana peroxisome 41.21 43.44
CDY06435 Canola vacuole 34.62 42.47
PGSC0003DMT400036886 Potato peroxisome 41.03 41.1
KRH02885 Soybean peroxisome 40.29 41.04
VIT_11s0052g01110.t01 Wine grape peroxisome 40.48 41.0
VIT_11s0052g01090.t01 Wine grape peroxisome 41.03 40.88
Solyc03g117870.2.1 Tomato plastid 40.66 40.73
HORVU6Hr1G030390.2 Barley peroxisome 41.21 40.69
KRH02884 Soybean peroxisome 40.66 40.59
CDX87831 Canola peroxisome 40.66 40.29
KRH23700 Soybean peroxisome 40.29 40.22
Bra030429.1-P Field mustard peroxisome 40.66 40.22
KRH09616 Soybean mitochondrion, peroxisome 39.56 40.15
PGSC0003DMT400074444 Potato peroxisome 39.93 40.15
CDY43921 Canola peroxisome 40.48 40.11
AT3G21240.1 Thale cress peroxisome 40.66 39.93
CDY19568 Canola peroxisome 40.11 39.67
Solyc06g068650.2.1 Tomato peroxisome 39.38 39.59
AT1G51680.1 Thale cress peroxisome 40.66 39.57
Bra031266.1-P Field mustard peroxisome 39.93 39.49
Solyc07g008360.1.1 Tomato peroxisome 40.11 38.56
PGSC0003DMT400051216 Potato peroxisome 40.11 38.35
PGSC0003DMT400037485 Potato peroxisome 38.1 37.96
Solyc12g042460.1.1 Tomato peroxisome 37.91 37.77
HORVU0Hr1G018190.2 Barley peroxisome 39.01 37.43
KRH02886 Soybean peroxisome, plastid 38.64 37.41
HORVU7Hr1G111130.3 Barley peroxisome, plastid 39.93 36.95
CDY68920 Canola peroxisome 35.9 35.44
CDY06431 Canola peroxisome 35.9 35.44
CDY19570 Canola peroxisome 36.26 35.42
CDX82208 Canola peroxisome 37.0 35.31
Bra031263.1-P Field mustard peroxisome 35.71 35.26
CDY32416 Canola peroxisome 37.0 35.19
Bra031265.1-P Field mustard peroxisome 35.9 35.06
AT3G21230.1 Thale cress peroxisome 36.45 34.91
Bra001819.1-P Field mustard peroxisome 36.63 34.84
Bra001820.1-P Field mustard peroxisome 36.08 33.68
KRH19011 Soybean peroxisome 33.88 32.92
HORVU2Hr1G066630.1 Barley cytosol, mitochondrion, peroxisome, plastid 23.44 28.38
HORVU4Hr1G081940.3 Barley peroxisome 25.09 24.91
HORVU3Hr1G100420.4 Barley peroxisome, plastid 25.64 24.14
HORVU4Hr1G012680.8 Barley peroxisome 24.36 23.88
HORVU4Hr1G012660.1 Barley peroxisome 23.63 23.84
HORVU4Hr1G012630.3 Barley peroxisome 24.91 23.69
HORVU3Hr1G089000.2 Barley peroxisome, plastid 25.27 23.55
HORVU4Hr1G072150.1 Barley peroxisome 22.89 22.44
HORVU1Hr1G051190.2 Barley peroxisome 23.26 19.97
CDY65966 Canola peroxisome 10.07 15.58
CDY71190 Canola peroxisome 10.07 14.86
Protein Annotations
EnsemblPlants:HORVU0Hr1G002720.3EnsemblPlantsGene:HORVU0Hr1G002720Gene3D:3.30.300.30Gene3D:3.40.50.12780GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152InterPro:AMP-bd_CInterPro:AMP-dep_Synth/Ligncoils:CoilPANTHER:PTHR24096
PANTHER:PTHR24096:SF244PFAM:PF00501PFAM:PF13193SEG:segSUPFAM:SSF56801UniParc:UPI000B479723
UniProt:A0A287DUX4MapMan:35.1::::
Description
No Description!
Coordinates
chrchrUn:+:11671158..11673010
Molecular Weight (calculated)
43610.3 Da
IEP (calculated)
9.197
GRAVY (calculated)
-0.239
Length
546 amino acids
Sequence
(BLAST)
001: TRSSCELPTK HHRLPPLSIY NYKYHSASSF HSTPQDNSIL QPAVRASTDP TAPPTNPFSS KRSKPDAKKW ARCRSSSSSR SSSAPRCRTS PSRTTSRSTT
101: TSSSAWPSAA TAPASSTAPR ARRSLXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXVKMM ELVERHGITI APLVPPIVVE MAKGDAMDRH
301: DLSSVRMVIS GAAPMGKELQ DIIHAKLPNA PPPPGYGMTE AGPVLSMCMA FAKEPSPVKS GACGTVVRNA ELKIVDPETG LCLGRNQPGE ICIRGRQIMK
401: GYLDNPEATA ETVDKDGWLH TGDVGFVDDD DEIFIVDRLK ELIKYKGFQV APAELEAMLI AHPGIADAAV VPMKDDASGE VPVAFVVPSS SEGADMTEDE
501: IKQYVAKQVV FYKRLQKVFF VSSIPKAPSG KILRKDLRAK LAAGAC
Best Arabidopsis Sequence Match ( AT1G51680.1 )
(BLAST)
001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L
Arabidopsis Description
4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.