Factsheet for HORVU0Hr1G018190.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plasma membrane
MultiLoc:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G294100.1	Wheat	peroxisome	95.43	94.76
TraesCS6A01G266700.1	Wheat	peroxisome	94.9	94.24
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	93.85	94.01
Os02t0697400-01	Rice	plasma membrane	85.76	85.76
EES05680	Sorghum	peroxisome	83.3	83.75
GSMUA_Achr11P...	Banana	peroxisome, plastid	68.54	73.17
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	67.66	71.56
Zm00001d051529_P001	Maize	peroxisome, plasma membrane	78.38	70.35
VIT_16s0039g02040.t01	Wine grape	peroxisome	67.14	69.71
Bra004109.1-P	Field mustard	peroxisome	64.15	65.65
CDY07442	Canola	peroxisome	64.15	65.65
KRH77759	Soybean	peroxisome	63.8	65.41
CDY39293	Canola	peroxisome	63.8	65.17
AT1G65060.1	Thale cress	peroxisome	64.15	65.06
KRH29003	Soybean	plastid	63.27	63.83
PGSC0003DMT400008182	Potato	peroxisome	63.44	63.44
Solyc03g097030.2.1	Tomato	peroxisome	63.27	63.16
KRH27719	Soybean	peroxisome	58.52	61.78
HORVU6Hr1G030390.2	Barley	peroxisome	58.52	60.22
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	59.4	57.29
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	20.21	50.44
HORVU2Hr1G066630.1	Barley	cytosol, mitochondrion, peroxisome, plastid	31.63	39.91
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	37.43	39.01
HORVU4Hr1G081940.3	Barley	peroxisome	34.97	36.18
HORVU4Hr1G012660.1	Barley	peroxisome	32.51	34.2
HORVU4Hr1G012630.3	Barley	peroxisome	33.74	33.45
HORVU4Hr1G012680.8	Barley	peroxisome	32.51	33.21
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	33.57	32.59
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	31.28	30.69
HORVU1Hr1G051190.2	Barley	peroxisome	32.51	29.09
HORVU4Hr1G072150.1	Barley	peroxisome	24.96	25.49

Protein Annotations

EnsemblPlants:HORVU0Hr1G018190.2	EnsemblPlantsGene:HORVU0Hr1G018190	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF169	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
UniParc:UPI000B46E1D8	UniProt:A0A287E4W3	MapMan:7.8.1.1	MapMan:9.2.1.3	:	:

Description

No Description!

Coordinates

chrchrUn:+:94026843..94029721

Molecular Weight (calculated)

60461.2 Da

IEP (calculated)

5.156

GRAVY (calculated)

0.246

Length

569 amino acids

Sequence
(BLAST)

001: MIKVAAPEVQ QPQAVAADAV SAVVPEETIF RSKLPDIDIP NHLPLHEYCF AKAAEVPDAP CLIAAATGRT YTFAETHALC RKAAAALHRL GVGHGDRVMI
101: LLQNCVEFAV AFFGASFLGA ISTAANPFCT PQEIHKQFVA SGAKVIVTQS AYVDKLRHES FPRIATGGGE DTLAVITVDD EAGTPDGCLP FWGILASADE
201: GSVPEVRIAA EDAVALPYSS GTTGLPKGVV LTHGGLVSSV AQQVDGENPN LYMREGDVAL CVLPLFHIFS LNSVLLCAVR ACAAVMLMPR FEMGAMLAGI
301: ERWRVTVAAV VPPLVLALAK NPVVEEHDLS SIRIVLSGAA PLGKELEDAL RGRLPQAIFG QGYGMTEAGP VLSMCPAFAR EPTPAKSGSC GTVVRNAELK
401: VVDPDTGLSL ARNLPGEICI RGPQIMKGYL DDPVATAATI DVEGWLHTGD IGYVDDDDEV FIVDRVKELI KFKGFQVPPA ELEALLIAHP SIADAAVVPQ
501: KDDAAGEVPV AFVVRAADSD IAEEAIKEFV SKQVVFYKRL HKVYFTHAIP KSASGKILRK ELRAKLVTV

Best Arabidopsis Sequence Match ( AT1G65060.1 )
(BLAST)

001: MITAALHEPQ IHKPTDTSVV SDDVLPHSPP TPRIFRSKLP DIDIPNHLPL HTYCFEKLSS VSDKPCLIVG STGKSYTYGE THLICRRVAS GLYKLGIRKG
101: DVIMILLQNS AEFVFSFMGA SMIGAVSTTA NPFYTSQELY KQLKSSGAKL IITHSQYVDK LKNLGENLTL ITTDEPTPEN CLPFSTLITD DETNPFQETV
201: DIGGDDAAAL PFSSGTTGLP KGVVLTHKSL ITSVAQQVDG DNPNLYLKSN DVILCVLPLF HIYSLNSVLL NSLRSGATVL LMHKFEIGAL LDLIQRHRVT
301: IAALVPPLVI ALAKNPTVNS YDLSSVRFVL SGAAPLGKEL QDSLRRRLPQ AILGQGYGMT EAGPVLSMSL GFAKEPIPTK SGSCGTVVRN AELKVVHLET
401: RLSLGYNQPG EICIRGQQIM KEYLNDPEAT SATIDEEGWL HTGDIGYVDE DDEIFIVDRL KEVIKFKGFQ VPPAELESLL INHHSIADAA VVPQNDEVAG
501: EVPVAFVVRS NGNDITEEDV KEYVAKQVVF YKRLHKVFFV ASIPKSPSGK ILRKDLKAKL C

Arabidopsis Description

4CL34-coumarate--CoA ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S777]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.