CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
vacuole 1
peroxisome 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0697400-01	Rice	plasma membrane	85.69	85.24
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	85.51	85.21
TraesCS6A01G266700.1	Wheat	peroxisome	85.51	84.47
TraesCS6B01G294100.1	Wheat	peroxisome	85.16	84.12
HORVU0Hr1G018190.2	Barley	peroxisome	83.75	83.3
Zm00001d051529_P001	Maize	peroxisome, plasma membrane	87.99	78.55
GSMUA_Achr11P...	Banana	peroxisome, plastid	70.32	74.67
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	70.49	74.16
VIT_16s0039g02040.t01	Wine grape	peroxisome	69.96	72.26
Bra004109.1-P	Field mustard	peroxisome	65.55	66.73
CDY07442	Canola	peroxisome	65.55	66.73
KRH77759	Soybean	peroxisome	65.37	66.67
PGSC0003DMT400008182	Potato	peroxisome	66.61	66.26
CDY39293	Canola	peroxisome	65.19	66.25
AT1G65060.1	Thale cress	peroxisome	65.37	65.95
Solyc03g097030.2.1	Tomato	peroxisome	66.25	65.79
KRH27719	Soybean	peroxisome	60.6	63.64
KRH29003	Soybean	plastid	63.25	63.48
EER90150	Sorghum	peroxisome	61.13	62.12
EES04623	Sorghum	peroxisome	59.72	60.9
EES15085	Sorghum	peroxisome	58.83	60.33
EES13602	Sorghum	peroxisome	56.71	56.22
OQU91476	Sorghum	peroxisome	42.23	42.91
KXG40154	Sorghum	peroxisome	40.28	41.23
EER95569	Sorghum	peroxisome	35.51	36.35
EER99996	Sorghum	plastid	36.4	34.05
EER97853	Sorghum	peroxisome, plastid	33.04	33.82
KXG38810	Sorghum	peroxisome	34.1	33.68
EES01913	Sorghum	peroxisome, plastid	32.69	33.33
EER98656	Sorghum	peroxisome, plastid	31.8	32.43
OQU88316	Sorghum	peroxisome, plastid	33.04	31.27
KXG38162	Sorghum	peroxisome	30.57	30.73
KXG26308	Sorghum	peroxisome	22.61	23.49

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:7.8.1.1	EntrezGene:8073882	MapMan:9.2.1.3	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	UniProt:C5Y0F9	EnsemblPlants:EES05680	ProteinID:EES05680	ProteinID:EES05680.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009653
GO:GO:0009987	GO:GO:0010584	GO:GO:0016043	GO:GO:0016207	GO:GO:0016874	PFAM:PF00501
PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF169	EnsemblPlantsGene:SORBI_3004G272700	SUPFAM:SSF56801
unigene:Sbi.13030	UniParc:UPI0001A85E04	RefSeq:XP_002452704.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:61636902..61641337

Molecular Weight (calculated)

60211.9 Da

IEP (calculated)

5.247

GRAVY (calculated)

0.187

Length

566 amino acids

Sequence
(BLAST)

001: MITVAAPEAQ PQVAAPAAPE ETVFRSKLPD IDIASHLPLH EYCFARAAEV ADAPCLIAAA TGRTYTYAET RLLCRKAAAS LHGLGVGHGD RVMILLQNSV
101: EFVLTFLGAS FLGAVTTAAN PFCTPLEIHK QFRASGAKLI VTQSAYVDKL RHEAFPRIGG EDKDNALTVL TIDDVADTPE GCLAFWELVT PADDAALPEV
201: SISPDDPVAL PFSSGTTGLP KGVVLTHGGQ VSNVAQQVDG ANPNLYMREG DVALCVLPLF HIFSLNSVLL CALRAGAAVM LMPKFEMGAM LEGIQRWRVT
301: VAAVVPPLVL ALAKNPALEK YDLSSIRIVL SGAAPLGKEL VDALRARVPQ AVFGQGYGMT EAGPVLSMCP AFAKEPTPAK PGSCGTVVRN AELKVVDPDT
401: GLSLGRNLPG EICIRGPQIM KGYLNDPEAT ARTIDVDGWL HTGDIGYVDD DDEVFIVDRV KELIKFKGFQ VPPAELEALL IAHPSIADAA VVPQKDDAAG
501: EVPVAFVVRA ADSDIAEDAI KEFISKQVVF YKRLHKVYFT PSIPKSASGK ILRRELRAKL AAAAST

Best Arabidopsis Sequence Match ( AT1G65060.1 )
(BLAST)

001: MITAALHEPQ IHKPTDTSVV SDDVLPHSPP TPRIFRSKLP DIDIPNHLPL HTYCFEKLSS VSDKPCLIVG STGKSYTYGE THLICRRVAS GLYKLGIRKG
101: DVIMILLQNS AEFVFSFMGA SMIGAVSTTA NPFYTSQELY KQLKSSGAKL IITHSQYVDK LKNLGENLTL ITTDEPTPEN CLPFSTLITD DETNPFQETV
201: DIGGDDAAAL PFSSGTTGLP KGVVLTHKSL ITSVAQQVDG DNPNLYLKSN DVILCVLPLF HIYSLNSVLL NSLRSGATVL LMHKFEIGAL LDLIQRHRVT
301: IAALVPPLVI ALAKNPTVNS YDLSSVRFVL SGAAPLGKEL QDSLRRRLPQ AILGQGYGMT EAGPVLSMSL GFAKEPIPTK SGSCGTVVRN AELKVVHLET
401: RLSLGYNQPG EICIRGQQIM KEYLNDPEAT SATIDEEGWL HTGDIGYVDE DDEIFIVDRL KEVIKFKGFQ VPPAELESLL INHHSIADAA VVPQNDEVAG
501: EVPVAFVVRS NGNDITEEDV KEYVAKQVVF YKRLHKVFFV ASIPKSPSGK ILRKDLKAKL C

Arabidopsis Description

4CL34-coumarate--CoA ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S777]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.