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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • peroxisome 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07442 Canola peroxisome 98.74 98.92
AT1G65060.1 Thale cress peroxisome 89.05 88.41
VIT_16s0039g02040.t01 Wine grape peroxisome 68.58 69.71
KRH77759 Soybean peroxisome 67.33 67.57
GSMUA_Achr11P... Banana peroxisome, plastid 62.66 65.48
EES05680 Sorghum peroxisome 66.25 65.19
Os02t0697400-01 Rice plasma membrane 66.07 64.67
TraesCS6D01G248000.1 Wheat peroxisome, plasma membrane 65.71 64.44
TraesCS6B01G294100.1 Wheat peroxisome 66.07 64.22
PGSC0003DMT400008182 Potato peroxisome 65.17 63.8
HORVU0Hr1G018190.2 Barley peroxisome 65.17 63.8
GSMUA_Achr2P18040_001 Banana peroxisome, plastid 61.58 63.75
KRH27719 Soybean peroxisome 61.58 63.64
TraesCS6A01G266700.1 Wheat peroxisome 65.35 63.53
Solyc03g097030.2.1 Tomato peroxisome 64.81 63.33
KRH29003 Soybean plastid 63.38 62.59
CDY53918 Canola peroxisome 20.83 62.03
CDX87831 Canola peroxisome 60.32 60.98
CDY43921 Canola peroxisome 60.14 60.8
CDY19568 Canola peroxisome 59.78 60.33
CDY32418 Canola peroxisome 19.57 59.56
Zm00001d051529_P001 Maize peroxisome, plasma membrane 63.02 55.36
CDY68920 Canola peroxisome 53.14 53.53
CDY06431 Canola peroxisome 53.14 53.53
CDX82208 Canola peroxisome 54.58 53.15
CDY32416 Canola peroxisome 54.76 53.14
CDY19570 Canola peroxisome 53.14 52.95
CDY48875 Canola mitochondrion, plastid, vacuole 42.19 52.93
CDY45731 Canola peroxisome 12.03 43.51
CDY71190 Canola peroxisome 28.37 42.7
CDY65966 Canola peroxisome 26.57 41.93
CDY06435 Canola vacuole 33.39 41.8
CDY46376 Canola peroxisome 39.86 41.19
CDY39153 Canola peroxisome 39.5 40.82
CDY39155 Canola peroxisome 39.68 40.77
CDY46375 Canola peroxisome 39.32 40.41
CDY45730 Canola vacuole 31.42 38.13
CDX96636 Canola golgi, vacuole 26.03 37.86
CDY71478 Canola vacuole 30.88 37.47
CDY39816 Canola peroxisome 35.55 36.67
CDY33631 Canola plastid 36.09 36.35
CDX96638 Canola peroxisome 34.29 36.24
CDY31472 Canola peroxisome 33.21 35.99
CDX96633 Canola plastid 35.73 35.99
CDY29527 Canola peroxisome 34.11 35.85
CDX78914 Canola peroxisome, plastid 35.37 34.32
CDY31883 Canola plastid 32.67 33.52
CDY33627 Canola peroxisome 33.39 33.39
CDY01369 Canola plastid 32.5 33.33
CDY01370 Canola peroxisome, plastid 32.32 32.73
CDX96637 Canola plastid 31.96 32.19
CDY33628 Canola plastid 31.6 31.88
CDY33629 Canola golgi, vacuole 22.98 30.26
CDY31474 Canola peroxisome 31.42 30.17
CDX99401 Canola peroxisome 32.32 26.95
CDY03253 Canola peroxisome 35.55 12.83
CDX78913 Canola cytosol 0.18 0.56
Protein Annotations
Gene3D:3.30.300.30Gene3D:3.40.50.12780MapMan:7.8.1.1MapMan:9.2.1.3GO:A0A078HRA7UniProt:A0A078HRA7
InterPro:AMP-bd_CInterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigEnsemblPlants:CDY39293ProteinID:CDY39293ProteinID:CDY39293.1
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152EnsemblPlantsGene:GSBRNA2T00067539001PFAM:PF00501
PFAM:PF13193ScanProsite:PS00455PANTHER:PTHR24096PANTHER:PTHR24096:SF169SUPFAM:SSF56801UniParc:UPI0004EDB8BE
SEG:seg:::::
Description
BnaC06g26980DBnaC06g26980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRA7]
Coordinates
chrLK032444:-:291031..296518
Molecular Weight (calculated)
60480.0 Da
IEP (calculated)
6.167
GRAVY (calculated)
-0.020
Length
557 amino acids
Sequence
(BLAST)
001: MITATLQEPQ IHQPVDTTTP PADAPPTPPR IFRSKLPDID IPNHLPLHNY CFQKLSSVSD KPCLIVGSTG KNYTYGETHL ICRRVAAGLH KMGIRKGDVI
101: MILLQNSAEF VFSFMGASMI GAVSTTANPF YTSQEIHKQV KSSGAKLIIT HSHYVDKLRN LDGETRIGED LTVITTEENP PPENCLPFST LLLTDDETTS
201: LDVVDVGGDD AAALPFSSGT TGLPKGVVLT HKSLITSVAQ QVDGDNPNLY LKPNDVVLCV LPLFHIYSLN SVLLNSIRSG ATVLLMHKFE IGALLDLIQR
301: HKVTVAALVP PLVIALAKNP TVNSYDLSSV RLVLSGAAPL GKDLEDSLGR RLPQAVLGQG YGMTEAGPVL SMSLGFAKEP TPSKSGSCGT VVRNAELKVV
401: HLETRLSLGY NQPGEICIRG QQIMKEYLND PEATSATIDE EGWLHTGDIG YVDEADEIFI VDRLKEVPPA ELEALLINHH SIADAAVVPQ RDEVAGEVPV
501: AFVVRSNGNV ITEEDIKEYI AKQVVFYKRL HKVFFVPSIP KSPSGKILRK DLKAKLC
Best Arabidopsis Sequence Match ( AT1G65060.1 )
(BLAST)
001: MITAALHEPQ IHKPTDTSVV SDDVLPHSPP TPRIFRSKLP DIDIPNHLPL HTYCFEKLSS VSDKPCLIVG STGKSYTYGE THLICRRVAS GLYKLGIRKG
101: DVIMILLQNS AEFVFSFMGA SMIGAVSTTA NPFYTSQELY KQLKSSGAKL IITHSQYVDK LKNLGENLTL ITTDEPTPEN CLPFSTLITD DETNPFQETV
201: DIGGDDAAAL PFSSGTTGLP KGVVLTHKSL ITSVAQQVDG DNPNLYLKSN DVILCVLPLF HIYSLNSVLL NSLRSGATVL LMHKFEIGAL LDLIQRHRVT
301: IAALVPPLVI ALAKNPTVNS YDLSSVRFVL SGAAPLGKEL QDSLRRRLPQ AILGQGYGMT EAGPVLSMSL GFAKEPIPTK SGSCGTVVRN AELKVVHLET
401: RLSLGYNQPG EICIRGQQIM KEYLNDPEAT SATIDEEGWL HTGDIGYVDE DDEIFIVDRL KEVIKFKGFQ VPPAELESLL INHHSIADAA VVPQNDEVAG
501: EVPVAFVVRS NGNDITEEDV KEYVAKQVVF YKRLHKVFFV ASIPKSPSGK ILRKDLKAKL C
Arabidopsis Description
4CL34-coumarate--CoA ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S777]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.