CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
peroxisome 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012233.1-P	Field mustard	plastid	99.82	100.0
CDY31883	Canola	plastid	97.24	97.24
CDY01370	Canola	peroxisome, plastid	82.14	81.09
CDX96637	Canola	plastid	79.01	77.58
CDY33628	Canola	plastid	78.27	76.99
AT1G20490.2	Thale cress	peroxisome	60.59	73.6
CDY31474	Canola	peroxisome	75.32	70.52
CDX96636	Canola	golgi, vacuole	48.99	69.45
CDX96633	Canola	plastid	67.22	66.0
CDY33631	Canola	plastid	67.03	65.82
CDY45731	Canola	peroxisome	18.42	64.94
VIT_18s0001g00290.t01	Wine grape	peroxisome	64.83	64.12
GSMUA_Achr8P13230_001	Banana	peroxisome	58.56	63.22
KRH17509	Soybean	peroxisome, plastid	63.9	63.21
CDY33629	Canola	golgi, vacuole	48.99	62.88
CDY31472	Canola	peroxisome	58.38	61.67
VIT_18s0001g00280.t01	Wine grape	peroxisome, plastid	62.06	61.38
Solyc12g094520.1.1	Tomato	plastid	61.33	60.44
PGSC0003DMT400075394	Potato	peroxisome, plastid	61.14	60.25
CDY29527	Canola	peroxisome	58.56	60.0
CDX96638	Canola	peroxisome	58.01	59.77
Zm00001d027519_P001	Maize	plasma membrane	59.3	58.44
EER95569	Sorghum	peroxisome	58.75	57.69
TraesCS4D01G323500.1	Wheat	plastid	58.38	57.53
HORVU4Hr1G081940.3	Barley	peroxisome	58.2	57.45
TraesCS5A01G498800.1	Wheat	peroxisome	58.2	57.25
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	57.83	56.88
Os03t0132000-01	Rice	plasma membrane	57.27	56.34
CDY33627	Canola	peroxisome	57.09	55.66
CDY45730	Canola	vacuole	42.91	50.76
CDY71478	Canola	vacuole	42.36	50.11
CDY53918	Canola	peroxisome	15.84	45.99
CDY32418	Canola	peroxisome	14.55	43.17
CDY46375	Canola	peroxisome	41.62	41.7
CDY39155	Canola	peroxisome	41.44	41.51
CDY39153	Canola	peroxisome	39.78	40.07
CDY46376	Canola	peroxisome	39.59	39.89
CDX78914	Canola	peroxisome, plastid	40.52	38.33
CDY68920	Canola	peroxisome	36.28	35.62
CDX87831	Canola	peroxisome	36.1	35.57
CDY19568	Canola	peroxisome	36.1	35.51
CDY43921	Canola	peroxisome	35.91	35.39
CDY06431	Canola	peroxisome	35.54	34.9
CDY48875	Canola	mitochondrion, plastid, vacuole	28.36	34.68
CDX82208	Canola	peroxisome	35.73	33.92
CDY39816	Canola	peroxisome	33.52	33.7
CDY32416	Canola	peroxisome	35.36	33.45
CDY19570	Canola	peroxisome	33.89	32.92
CDY07442	Canola	peroxisome	33.7	32.91
CDY39293	Canola	peroxisome	33.33	32.5
CDX99401	Canola	peroxisome	37.02	30.09
CDY06435	Canola	vacuole	23.2	28.31
CDY71190	Canola	peroxisome	18.6	27.3
CDY65966	Canola	peroxisome	16.02	24.65
CDY03253	Canola	peroxisome	33.7	11.86
CDX78913	Canola	cytosol	0.18	0.56

Protein Annotations

MapMan:11.7.1.7	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:A0A078EKU7	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	EnsemblPlants:CDY01369	ProteinID:CDY01369	ProteinID:CDY01369.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00112346001	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455
PANTHER:PTHR24096	PANTHER:PTHR24096:SF186	SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI0004EE2508	SEG:seg

Description

BnaA07g11420D

Coordinates

chrLK031926:+:558699..561406

Molecular Weight (calculated)

59039.3 Da

IEP (calculated)

8.519

GRAVY (calculated)

-0.008

Length

543 amino acids

Sequence
(BLAST)

001: MASLIDSRSG FCKSNSTFYS KRNPLPLPAN PSLDVTTFIS SQPHRGTTAF IDAATGHRLS FSELWTAVER VADCLHHDIG LKRGHVVLIL SPNSIYIPVV
101: SLAVMSLGAV VTTANTLNTA AEISRQLADS NPTLAFTTAD LAPKLAGSGI SVVLERVGST RGVDVVGAVS EMMKKERRGQ RVRDRVNEED TAMMLYSSGT
201: TGPSKGVITS HRNLTASVAR FVSEKRIGGE VFLCTVPMFH TYGLLCFTMF TVAVGSTVVI LRRFDLHGMM AAVEKYSATI LALTPPVVVA MTNEADVIRA
301: KYDLSSLRTV RCGGAPLSKE VTEGFMEKYP TVDILAGYAL TESNGAGASI DTVEESRRYG SVGLLAPGVE ARIVDPDTGR VMGVNQTGEL WLRGPSISKG
401: YFKNEEATNE TINLEGWLKT GDICYIDEDG FLFVVDRLKE LIKYKGYQVP PAELEALLVT HPDILDAAVI PFPDKEAGQY PMAYVTRKIE SNLSEKQIID
501: FVSKQQVAPY KKIRKVAFIN SIPKNPSGKT LRKDLIKLAT SKI

Best Arabidopsis Sequence Match ( AT1G20500.1 )
(BLAST)

001: MAYPERSLIV DPRSGFCKSN STFYSKRQPL SLPPNLSRDV TTFISSQPHR GKTAFIDAAT GQCLTFSDLW RAVDRVADCL YHEVGIRRGD VVLILSPNSI
101: FIPVVCLSVM SLGAVFTTAN TLNTSGEISK QIADSNPTLV FTTRQLAPKL PVAISVVLTD DEVYQELTSA IRVVGILSEM VKKEPSGQRV RDRVNQDDTA
201: MMLYSSGTTG PSKGVISSHR NLTAHVARFI SDNLKRDDIF ICTVPMFHTY GLLTFAMGTV ALGSTVVILR RFQLHDMMDA VEKHRATALA LAPPVLVAMI
301: NDADLIKAKY DLSSLKTVRC GGAPLSKEVT EGFLEKYPTV DILQGYALTE SNGGGAFTNS AEESRRYGTA GTLTSDVEAR IVDPNTGRFM GINQTGELWL
401: KGPSISKGYF KNQEATNETI NLEGWLKTGD LCYIDEDGFL FVVDRLKELI KYKGYQVPPA ELEALLITHP DILDAAVIPF PDKEAGQYPM AYVVRKHESN
501: LSEKQVIDFI SKQVAPYKKI RKVSFINSIP KTASGKTLRK DLIKLATSKL

Arabidopsis Description

4CLL44-coumarate--CoA ligase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:P0C5B6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.