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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • cytosol 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 3
  • plasma membrane 2
  • golgi 2
  • peroxisome 2
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:cytosol, peroxisome, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:peroxisome
PProwler:peroxisome
TargetP:secretory
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71478 Canola vacuole 96.51 96.51
CDY45731 Canola peroxisome 32.03 95.45
AT5G63380.1 Thale cress peroxisome 86.27 70.46
VIT_17s0000g01790.t01 Wine grape peroxisome, plastid 64.27 53.64
PGSC0003DMT400039281 Potato peroxisome 63.4 52.72
Solyc03g111170.2.1 Tomato nucleus 63.18 52.54
KRH63739 Soybean peroxisome, plastid 65.36 51.72
KRH54211 Soybean peroxisome 64.92 49.92
EES01913 Sorghum peroxisome, plastid 59.26 49.01
GSMUA_Achr5P25570_001 Banana peroxisome 57.73 48.01
TraesCS3D01G388100.1 Wheat peroxisome 58.61 47.86
TraesCS3A01G394300.1 Wheat peroxisome 58.17 47.68
TraesCS3B01G426300.1 Wheat peroxisome 57.73 47.15
CDX96636 Canola golgi, vacuole 38.78 46.48
TraesCS3A01G394200.1 Wheat peroxisome, plastid 56.43 46.42
CDY53918 Canola peroxisome 18.74 45.99
CDY32418 Canola peroxisome 18.3 45.9
HORVU3Hr1G089000.2 Barley peroxisome, plastid 58.17 45.56
TraesCS3B01G426200.1 Wheat peroxisome, plastid 55.12 45.18
CDY01369 Canola plastid 50.76 42.91
Os01t0901600-01 Rice peroxisome, plastid 55.56 42.64
Zm00001d018660_P001 Maize peroxisome 52.29 42.63
CDY31883 Canola plastid 50.11 42.36
CDX96638 Canola peroxisome 48.58 42.31
HORVU4Hr1G012660.1 Barley peroxisome 49.67 42.14
CDY31472 Canola peroxisome 47.06 42.02
EER97853 Sorghum peroxisome, plastid 50.54 41.95
CDY33629 Canola golgi, vacuole 38.56 41.84
TraesCS4B01G076100.1 Wheat peroxisome 49.46 41.8
CDY29527 Canola peroxisome 48.15 41.7
CDY33631 Canola plastid 50.11 41.59
TraesCS4D01G074700.1 Wheat peroxisome 49.46 41.58
CDY33628 Canola plastid 49.67 41.3
GSMUA_Achr1P13470_001 Banana peroxisome 46.19 41.09
TraesCS4A01G239100.2 Wheat plastid 48.58 41.07
CDX96633 Canola plastid 49.46 41.05
TraesCS4A01G239000.1 Wheat peroxisome 49.24 41.02
TraesCS4D01G074500.1 Wheat plastid 48.37 40.88
TraesCS4D01G074600.1 Wheat peroxisome 49.02 40.83
TraesCS4B01G075900.1 Wheat plastid 48.15 40.7
CDX96637 Canola plastid 49.02 40.69
TraesCS3D01G388000.2 Wheat peroxisome, plastid 52.72 40.6
HORVU4Hr1G012680.8 Barley peroxisome 49.24 40.57
TraesCS3B01G515400.1 Wheat peroxisome 48.58 40.55
TraesCS4B01G076000.1 Wheat peroxisome 48.37 40.29
TraesCS3A01G472200.1 Wheat peroxisome 48.15 40.18
TraesCS5D01G561500.1 Wheat peroxisome 48.58 40.18
Os07t0280200-01 Rice peroxisome 48.8 40.14
OQU88316 Sorghum peroxisome, plastid 52.07 39.97
TraesCS3D01G468000.1 Wheat peroxisome 48.15 39.89
CDY01370 Canola peroxisome, plastid 47.71 39.82
Os01t0901500-01 Rice plastid 38.13 39.59
TraesCS5B01G570100.1 Wheat peroxisome 47.71 39.53
EER98656 Sorghum peroxisome, plastid 47.71 39.46
Zm00001d019957_P002 Maize peroxisome 48.58 39.19
CDY33627 Canola peroxisome 47.49 39.14
Zm00001d012144_P001 Maize plastid 34.64 38.78
HORVU3Hr1G100420.4 Barley peroxisome, plastid 48.8 38.62
HORVU4Hr1G012630.3 Barley peroxisome 47.93 38.33
CDY39155 Canola peroxisome 45.1 38.19
CDY46375 Canola peroxisome 44.88 38.01
CDY31474 Canola peroxisome 47.49 37.59
CDY46376 Canola peroxisome 42.7 36.36
CDY39153 Canola peroxisome 42.7 36.36
KXG38162 Sorghum peroxisome 44.23 36.06
CDY48875 Canola mitochondrion, plastid, vacuole 34.86 36.04
CDY39816 Canola peroxisome 39.0 33.15
CDX78914 Canola peroxisome, plastid 41.39 33.1
CDY19568 Canola peroxisome 38.78 32.25
CDY43921 Canola peroxisome 38.56 32.12
CDY68920 Canola peroxisome 38.34 31.83
CDY06431 Canola peroxisome 38.13 31.65
CDX87831 Canola peroxisome 37.91 31.58
CDY07442 Canola peroxisome 38.13 31.47
CDY39293 Canola peroxisome 38.13 31.42
TraesCS4A01G238800.1 Wheat plastid 28.98 30.79
CDX82208 Canola peroxisome 38.34 30.77
CDY32416 Canola peroxisome 37.91 30.31
CDY19570 Canola peroxisome 36.82 30.23
CDY06435 Canola vacuole 28.1 28.99
CDX99401 Canola peroxisome 40.74 27.99
CDY65966 Canola peroxisome 16.56 21.53
CDY71190 Canola peroxisome 16.99 21.08
CDY03253 Canola peroxisome 39.0 11.6
CDX78913 Canola cytosol 0.22 0.56
Protein Annotations
Gene3D:2.30.38.10Gene3D:3.30.300.30Gene3D:3.40.50.980MapMan:35.1GO:A0A078I4F2UniProt:A0A078I4F2
InterPro:AMP-bd_CInterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigEnsemblPlants:CDY45730ProteinID:CDY45730ProteinID:CDY45730.1
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152EnsemblPlantsGene:GSBRNA2T00082642001PFAM:PF00501
PFAM:PF13193ScanProsite:PS00455PANTHER:PTHR24096PANTHER:PTHR24096:SF251SUPFAM:SSF56801TMHMM:TMhelix
UniParc:UPI0004EEC54ASEG:seg::::
Description
BnaC02g42520DBnaC02g42520D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078I4F2]
Coordinates
chrLK032635:+:1..2210
Molecular Weight (calculated)
49815.7 Da
IEP (calculated)
7.648
GRAVY (calculated)
0.054
Length
459 amino acids
Sequence
(BLAST)
001: TSGDVAFILS PASLHVPVIY LALMSIGVVI SPANPIGSEV EVSHQVEVSK PVIAFATSET VNKLRSGSFP LGVVLIDSPE FLSWLTKPEL DNPIPVRVNQ
101: TDTAAILFSS GTTGKVKGVI LTHRNVIAST AVSHQRAVND PVDYDRVGLF PLPLFHVFGF AMMIRAISLG EKLVLLGRFE LEAMMKAVEK YKVTGMPVSP
201: PLIVALVKSE LTRKYDLSSL RSLGCGGAPL GKDIAERFKR KFPGVDIVQG YGLTESTGQA AVTSGPEEMV RYGSVGRISE NMEAKIVDPS TGEALPPGKN
301: GELWLRGPVI MKGYVENEKA TAETLDQEGW LKTGDLCYID HEGFLYIVDR LKELIKYKAY QVPPVELEQI LQSNPDVVDA AVVPFPDEDA GEIPMAFIVR
401: KPGSNLNEAQ IIDFVAKQVA PYKKVRRVAF INAIPKNPAG KILRRGLTKI AVDGNKSKL
Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)
001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL
Arabidopsis Description
4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.