Factsheet for TraesCS4D01G074500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G239100.2	Wheat	plastid	95.21	95.21
TraesCS4B01G075900.1	Wheat	plastid	94.48	94.48
HORVU4Hr1G012630.3	Barley	peroxisome	93.0	87.98
EER97853	Sorghum	peroxisome, plastid	70.9	69.62
Zm00001d018660_P001	Maize	peroxisome	70.17	67.67
OQU88316	Sorghum	peroxisome, plastid	71.27	64.72
CDY45731	Canola	peroxisome	15.47	54.55
TraesCS4D01G074600.1	Wheat	peroxisome	50.46	49.73
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	50.28	49.64
TraesCS4D01G074700.1	Wheat	peroxisome	49.72	49.45
TraesCS3D01G388100.1	Wheat	peroxisome	50.83	49.11
TraesCS3D01G468000.1	Wheat	peroxisome	49.54	48.56
CDY45730	Canola	vacuole	40.88	48.37
CDY71478	Canola	vacuole	40.7	48.15
VIT_14s0171g00300.t01	Wine grape	peroxisome	47.88	47.88
TraesCS5D01G561500.1	Wheat	peroxisome	48.43	47.39
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	47.88	47.27
Solyc03g111170.2.1	Tomato	nucleus	47.51	46.74
KRG94318	Soybean	peroxisome, plastid	46.41	46.58
PGSC0003DMT400039281	Potato	peroxisome	47.33	46.56
KRH57646	Soybean	peroxisome, plastid	46.59	45.83
KRH63739	Soybean	peroxisome, plastid	48.62	45.52
Bra029229.1-P	Field mustard	peroxisome	46.41	45.08
VIT_14s0171g00290.t01	Wine grape	peroxisome	44.75	44.92
KRH54211	Soybean	peroxisome	48.62	44.22
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	48.43	44.13
AT5G63380.1	Thale cress	peroxisome	45.49	43.95
TraesCS4D01G323500.1	Wheat	plastid	44.57	43.92
TraesCS1D01G200200.1	Wheat	peroxisome	39.59	37.85
TraesCS2D01G150400.1	Wheat	peroxisome	35.73	35.93
TraesCS4D01G268400.1	Wheat	peroxisome	35.73	35.47
TraesCS7D01G483400.1	Wheat	peroxisome	35.91	34.82
KRH57649	Soybean	plastid	17.86	34.64
TraesCS6D01G141700.1	Wheat	peroxisome	34.99	34.61
KRG94321	Soybean	cytosol, golgi, peroxisome	20.07	34.6
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	35.36	33.8
TraesCS2D01G272200.1	Wheat	plastid	34.25	30.05

Protein Annotations

EnsemblPlants:TraesCS4D01G074500.1	EnsemblPlantsGene:TraesCS4D01G074500	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF298	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:49083865..49086549

Molecular Weight (calculated)

57445.9 Da

IEP (calculated)

8.470

GRAVY (calculated)

0.291

Length

543 amino acids

Sequence
(BLAST)

001: MPSAAAVDPQ SGYCAVTRTF HSLRAPIPLP PPSPPLSFPA FAFSLLPSPL PAHAAFLDAA TGEAVPFPAF LGQVRALATA LRAQLHISRG DVAFVLAPPS
101: LHIPVLYFAL MAVGAVVSPA NPALTTGELA HLAALSKPSV AFAVSSAAGK LPPGLSAVLL DSPRFLSFLH GPGDALAMDA AVIYQSDPAA ILYSSGTTGS
201: AKAVVLTHRN LMTTRVLPGP APPDEVLMLT VPLFHVYGFV FCLRPVMAAQ TLVLHTARRF DTRAVLAAVG RFRVTRLALA PPALLAIVRA AEDDKSVAAS
301: AATLQVVLCG GAALSPELIR RFSHKFPHVF VSQGYGLTET TAGFCRSIGV EESRRIGSVG RLSPGAEAKI IDPGTGDALP PGVPGELWVR GPFVMEGYLG
401: DKESTSEILD SEGWLRTGDV CLIDKDGFLS VVDRLKEIIK YKGYQVAPTE LEDLLQTHPG IDEAAVVGYT DDQTGELPVA FVVGRSGSNL HEAHIKDFVA
501: KQVVHYKRIH RVFLVDSIPK NAAGKILRKD LAKLALHRIN AKL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.