Factsheet for HORVU4Hr1G012630.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

mitochondrion 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
TargetP:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G075900.1	Wheat	plastid	89.2	94.29
TraesCS4D01G074500.1	Wheat	plastid	87.98	93.0
TraesCS4A01G239100.2	Wheat	plastid	86.93	91.9
EER97853	Sorghum	peroxisome, plastid	65.85	68.35
Zm00001d018660_P001	Maize	peroxisome	64.98	66.25
OQU88316	Sorghum	peroxisome, plastid	65.51	62.88
CDY45731	Canola	peroxisome	14.46	53.9
HORVU4Hr1G012680.8	Barley	peroxisome	49.48	50.99
HORVU4Hr1G012660.1	Barley	peroxisome	47.04	49.91
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	47.21	49.27
CDY45730	Canola	vacuole	38.33	47.93
CDY71478	Canola	vacuole	38.15	47.71
VIT_14s0171g00300.t01	Wine grape	peroxisome	44.95	47.51
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	45.47	47.45
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	47.91	47.41
KRG94318	Soybean	peroxisome, plastid	44.08	46.77
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	18.47	46.49
Solyc03g111170.2.1	Tomato	nucleus	44.25	46.01
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	46.86	45.9
PGSC0003DMT400039281	Potato	peroxisome	44.08	45.83
KRH63739	Soybean	peroxisome, plastid	46.17	45.69
KRH57646	Soybean	peroxisome, plastid	43.55	45.29
Bra029229.1-P	Field mustard	peroxisome	43.9	45.08
VIT_14s0171g00290.t01	Wine grape	peroxisome	41.99	44.55
KRH54211	Soybean	peroxisome	45.99	44.22
HORVU4Hr1G081940.3	Barley	peroxisome	41.46	43.27
AT5G63380.1	Thale cress	peroxisome	41.81	42.7
HORVU2Hr1G066630.1	Barley	cytosol, mitochondrion, peroxisome, plastid	28.22	35.92
KRG94321	Soybean	cytosol, golgi, peroxisome	18.64	33.97
KRH57649	Soybean	plastid	16.55	33.93
HORVU0Hr1G018190.2	Barley	peroxisome	33.45	33.74
HORVU6Hr1G030390.2	Barley	peroxisome	32.23	33.45
HORVU1Hr1G051190.2	Barley	peroxisome	36.93	33.33
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	32.93	32.03
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	23.69	24.91
HORVU4Hr1G072150.1	Barley	peroxisome	23.34	24.06

Protein Annotations

EnsemblPlants:HORVU4Hr1G012630.3	EnsemblPlantsGene:HORVU4Hr1G012630	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF298	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
UniParc:UPI000B46F6F0	UniProt:A0A287N926	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:42224984..42228980

Molecular Weight (calculated)

60863.0 Da

IEP (calculated)

8.188

GRAVY (calculated)

0.284

Length

574 amino acids

Sequence
(BLAST)

001: SLTLSLTDVR LCRVPSHCCH PATLQLSSQS IMPSAAAVDP LSGYCAVTRT FHSLRAPIPL PPPAQPLSFP AFAFSFLPSP LPSHAAFLDA ATGEAVPFPA
101: FLGQVRALAT ALRAHLHISR GDVAFILAPP SLHVPVLYFA LMAVGAVISP ANPALTAGEL AHLAALSKPS VAFAVSSAAS KLPPGLSAVL LDSPRFSSFL
201: HGPGDASVMD AAVIYQSEPA AILYSSGTTG SAKAVVLTHR NLMTTRAMPG PAPPDEVVML TVPLFHVYGF VFCLRPVMAA QTLVLHTARR FDTRGVLAAV
301: GRFRVTRLAL APPSLLAIVR TAEDDESVTA SAATLQVVLC GGAALSPGLI RRFSHKFPHI CVLQGYGLTE TTAGFCRSIG VEESRRIGSV GRLSPGAEAK
401: IIDPGTGDAL PPGVPGELWV RGPFVMEGYR GDKESTSEIL DSEGWLRTGD VCLIDKDGFL FVVDRLKEII KYNGYQVAPA ELEDLLQTHP GIDEAAVVGY
501: ADDQAGELPV AFVVQHSGSK VHEAQIKDFV AKQVVHYKRI HRVFLVDSIP KNAAGKILRK DLAKLALHRI NAKL

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.