Factsheet for HORVU3Hr1G100420.4

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 3
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G515400.1	Wheat	peroxisome	84.48	89.09
TraesCS3A01G472200.1	Wheat	peroxisome	82.76	87.27
TraesCS3D01G468000.1	Wheat	peroxisome	83.28	87.18
HORVU4Hr1G012680.8	Barley	peroxisome	79.48	82.76
HORVU4Hr1G012660.1	Barley	peroxisome	76.21	81.7
Os07t0280200-01	Rice	peroxisome	68.62	71.33
EER98656	Sorghum	peroxisome, plastid	66.55	69.55
Zm00001d019957_P002	Maize	peroxisome	68.1	69.42
CDY45731	Canola	peroxisome	16.9	63.64
GSMUA_Achr1P13470_001	Banana	peroxisome	50.69	56.98
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	19.66	50.0
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	47.24	49.82
PGSC0003DMT400039281	Potato	peroxisome	46.9	49.28
CDY71478	Canola	vacuole	38.79	49.02
CDY45730	Canola	vacuole	38.62	48.8
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	49.14	48.63
Solyc03g111170.2.1	Tomato	nucleus	46.21	48.55
HORVU4Hr1G012630.3	Barley	peroxisome	47.41	47.91
VIT_14s0171g00300.t01	Wine grape	peroxisome	44.31	47.33
KRH63739	Soybean	peroxisome, plastid	46.72	46.72
Bra029229.1-P	Field mustard	peroxisome	44.48	46.15
VIT_14s0171g00290.t01	Wine grape	peroxisome	42.76	45.84
KRH54211	Soybean	peroxisome	46.9	45.56
AT5G63380.1	Thale cress	peroxisome	43.28	44.66
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	42.07	44.36
KRG94318	Soybean	peroxisome, plastid	41.03	43.99
KRH57646	Soybean	peroxisome, plastid	41.55	43.66
HORVU4Hr1G081940.3	Barley	peroxisome	38.62	40.73
HORVU2Hr1G066630.1	Barley	cytosol, mitochondrion, peroxisome, plastid	28.62	36.81
HORVU1Hr1G051190.2	Barley	peroxisome	37.24	33.96
HORVU6Hr1G030390.2	Barley	peroxisome	30.34	31.83
KRH57649	Soybean	plastid	15.34	31.79
KRG94321	Soybean	cytosol, golgi, peroxisome	17.24	31.75
HORVU0Hr1G018190.2	Barley	peroxisome	30.69	31.28
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	30.52	30.0
HORVU4Hr1G072150.1	Barley	peroxisome	24.66	25.67
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	24.14	25.64

Protein Annotations

EnsemblPlants:HORVU3Hr1G100420.4	EnsemblPlantsGene:HORVU3Hr1G100420	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF269	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
UniParc:UPI000B482ED4	UniProt:A0A287MHW9	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:663492231..663515992

Molecular Weight (calculated)

61334.0 Da

IEP (calculated)

9.202

GRAVY (calculated)

0.214

Length

580 amino acids

Sequence
(BLAST)

001: LHQPLCPCPA HPLTGLTLDQ RLPQSRMPSS AHAAMDARTG YCPTTKSFLS LRAPLPLPLP PADVPLTFPA FALSLLPSPL PAHPALLDAA TSEAISYPAF
101: LSQVRTLVGA LRTRVLPLGR GDVAFVLAPA RLDVPVLYFA LLAAGVVVSP ANPALTAGEV SRLVSLSGAS VAFAVASTAA KLPAGLPAIL LDSPHFRSLL
201: RSSNHVDVEN QSEPLHAGAV RQSATATILY SSGTTGRVKA AAVPHRSFIA RAAGFHALHV KSGKANERTL MGAPMFHSMG FFFTLNGLAQ GSTIVVMTGP
301: AARAGLRGML EAARRWEVTE ITAAPPVVLG MAKDGGCRLS SLLRVICGGA PLPGSVAEQF LRRFPHVDLC MGYGSTEAGG ISLMMDRDEC SRIGSAGRIS
401: LNVVAKIVDM VTGEPLSVGQ KGELWVRGPA IMTGYIGDDE ANAAAFDSEG WLKTGDLCYI DQDGFLFVVD RLKELIKYKA YQVAPAELEL VLQSLPGIVD
501: AAVMPYPHEE AGEVPMALVV RQPGSKVTEA QVMEHVAKQV APYKKVRKVL FVDSIPKSPA GKILRRQLSA HMRSCPASRL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.