Factsheet for GSMUA_Achr1P13470_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 4
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45731	Canola	peroxisome	17.64	59.09
EER98656	Sorghum	peroxisome, plastid	58.91	54.77
TraesCS4A01G239000.1	Wheat	peroxisome	57.95	54.27
Os07t0280200-01	Rice	peroxisome	58.14	53.76
TraesCS4B01G076000.1	Wheat	peroxisome	57.36	53.72
TraesCS4D01G074600.1	Wheat	peroxisome	57.17	53.54
TraesCS4D01G074700.1	Wheat	peroxisome	56.2	53.11
GSMUA_Achr9P07820_001	Banana	peroxisome	18.6	52.75
TraesCS3B01G515400.1	Wheat	peroxisome	56.2	52.73
TraesCS3A01G472200.1	Wheat	peroxisome	56.2	52.73
Zm00001d019957_P002	Maize	peroxisome	58.14	52.72
HORVU4Hr1G012660.1	Barley	peroxisome	55.04	52.5
HORVU4Hr1G012680.8	Barley	peroxisome	56.59	52.42
GSMUA_Achr5P25570_001	Banana	peroxisome	54.84	51.27
TraesCS3D01G468000.1	Wheat	peroxisome	55.04	51.26
TraesCS4B01G076100.1	Wheat	peroxisome	53.88	51.2
TraesCS5B01G570100.1	Wheat	peroxisome	54.84	51.08
TraesCS5D01G561500.1	Wheat	peroxisome	54.84	50.99
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	56.98	50.69
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	52.91	49.64
KXG38162	Sorghum	peroxisome	53.29	48.85
PGSC0003DMT400039281	Potato	peroxisome	50.97	47.64
KRH63739	Soybean	peroxisome, plastid	53.1	47.24
TraesCS4A01G238800.1	Wheat	plastid	39.53	47.22
Solyc03g111170.2.1	Tomato	nucleus	50.19	46.92
CDY45730	Canola	vacuole	41.09	46.19
CDY71478	Canola	vacuole	40.7	45.75
KRH54211	Soybean	peroxisome	52.71	45.56
VIT_14s0171g00300.t01	Wine grape	peroxisome	47.29	44.94
AT5G63380.1	Thale cress	peroxisome	48.45	44.48
VIT_14s0171g00290.t01	Wine grape	peroxisome	46.51	44.36
Bra029229.1-P	Field mustard	peroxisome	47.67	44.01
KRG94318	Soybean	peroxisome, plastid	45.35	43.25
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	45.35	42.55
KRH57646	Soybean	peroxisome, plastid	44.19	41.3
GSMUA_Achr8P13230_001	Banana	peroxisome	39.53	40.56
GSMUA_AchrUn_...	Banana	peroxisome	38.18	40.12
GSMUA_Achr8P14210_001	Banana	peroxisome	36.24	37.7
GSMUA_Achr11P...	Banana	peroxisome, plasma membrane	24.22	36.76
GSMUA_Achr5P19650_001	Banana	peroxisome	34.5	36.63
GSMUA_Achr9P22840_001	Banana	peroxisome	25.58	34.55
GSMUA_AchrUn_...	Banana	peroxisome	36.05	33.88
GSMUA_Achr11P...	Banana	peroxisome	34.69	32.9
GSMUA_Achr7P05070_001	Banana	peroxisome	31.01	32.45
GSMUA_Achr1P23450_001	Banana	peroxisome	32.17	31.92
GSMUA_AchrUn_...	Banana	peroxisome	31.98	31.85
GSMUA_Achr4P05820_001	Banana	peroxisome	31.78	31.42
GSMUA_Achr4P12590_001	Banana	peroxisome	29.65	31.29
GSMUA_Achr6P36020_001	Banana	peroxisome	29.84	31.11
GSMUA_Achr11P...	Banana	peroxisome, plastid	31.4	30.39
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	31.2	29.93
KRG94321	Soybean	cytosol, golgi, peroxisome	17.83	29.21
KRH57649	Soybean	plastid	15.31	28.21

Protein Annotations

EnsemblPlants:GSMUA_Achr1P13470_001	EnsemblPlants:GSMUA_Achr1T13470_001	EnsemblPlantsGene:GSMUA_Achr1G13470_001	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
PANTHER:PTHR24096	PANTHER:PTHR24096:SF269	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg
SUPFAM:SSF56801	UniParc:UPI00029679F4	UniProt:M0RZK5	MapMan:35.1	:	:

Description

4-coumarate--CoA ligase-like 7 [Source:GMGC_GENE;Acc:GSMUA_Achr1G13470_001]

Coordinates

chr1:-:10282070..10288936

Molecular Weight (calculated)

55543.3 Da

IEP (calculated)

8.581

GRAVY (calculated)

0.025

Length

516 amino acids

Sequence
(BLAST)

001: MEEKAVTPTP PSTSPAIDPR SGFDAVSRTF HSLRPPVPLP ARDRPLSFTS YAVSLLPSPL PSLPAVVDAA TGDALSFPDL LSQIHSLAAA LRTEVGLSKG
101: HVAFILCPAR LDPRVAFATS ETAAKLPGDV PTILLDSPRF RSFLAGSGGE VPPEEEVGQM DVAVIQYSSG TTGMVKAAAL SHLNFIAMVA GFHASRKLAA
201: ERRRREAPDV TVVGAPLFHS MGFFFLLKGI ALGETTVVMG GGGGAREMLR VAEKYRATSL TASPPVVVAM ARWEEKIDLA ALEFVTCGGA PLHEAAAHQF
301: MSRFPDVELR QGYGSTEGGG IARMIDREEC LHLRSVGRLS QNVEAKIVDS VTGETLSIGQ TGELWIRGPS IMIGNKANAS TFAPGGWLKT GDLCYFNQDG
401: FLFIVDRLKE MIKYKAYQVP PAELEHLLLS LPGVADAAVV PYPHEEAGQI PMAFIVRQPG NNLKESEIMD FIAKQVAPYK KIRKVVFTSS IPKTASGKIL
501: RRQLRNHSIY SSMSRL

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.