Factsheet for GSMUA_AchrUn_randomP04230_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P07820_001	Banana	peroxisome	14.03	42.31
Os07t0639100-00	Rice	peroxisome	45.54	42.09
GSMUA_Achr8P13230_001	Banana	peroxisome	37.16	40.56
GSMUA_AchrUn_...	Banana	peroxisome	35.88	40.12
GSMUA_Achr8P14210_001	Banana	peroxisome	36.07	39.92
GSMUA_Achr11P...	Banana	peroxisome, plasma membrane	24.41	39.41
GSMUA_Achr5P19650_001	Banana	peroxisome	33.52	37.86
GSMUA_Achr6P36020_001	Banana	peroxisome	33.52	37.17
GSMUA_Achr5P25570_001	Banana	peroxisome	37.16	36.96
GSMUA_Achr11P...	Banana	peroxisome	35.88	36.21
GSMUA_Achr9P22840_001	Banana	peroxisome	25.14	36.13
GSMUA_Achr1P13470_001	Banana	peroxisome	33.88	36.05
GSMUA_Achr1P23450_001	Banana	peroxisome	31.15	32.88
GSMUA_AchrUn_...	Banana	peroxisome	30.97	32.82
GSMUA_Achr7P05070_001	Banana	peroxisome	29.33	32.66
GSMUA_Achr4P12590_001	Banana	peroxisome	28.05	31.49
GSMUA_Achr4P05820_001	Banana	peroxisome	28.96	30.46
GSMUA_Achr11P...	Banana	peroxisome, plastid	29.51	30.39
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	28.6	29.18

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP04230_001	EnsemblPlants:GSMUA_AchrUn_randomT04230_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG04230_001	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
PANTHER:PTHR24096	PANTHER:PTHR24096:SF251	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg
SUPFAM:SSF56801	UniParc:UPI0002958A89	UniProt:M0U685	MapMan:35.1	:	:

Description

Putative 4-coumarate--CoA ligase-like 8 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04230_001]

Coordinates

chrchrUn_random:+:17961764..17964951

Molecular Weight (calculated)

59148.5 Da

IEP (calculated)

7.899

GRAVY (calculated)

0.051

Length

549 amino acids

Sequence
(BLAST)

001: MDSVSGESGY CSTTGIYRSP LVPPPPLHLP CVSLPHFLLL STPAPPTKPA FVDAVSGDSL SYAELHSLTA AAASALSSAG LRRGDLALLV SPNSIHYPVL
101: ALAPFLASLP REVDPPLPDV DVGPGHPATV MYSSGTTGKS KGVVSTHGNL TATASLLRHV WGGEARRDDV YACVVPLSHM FGFSVLVCGT LASGATTVVL
201: RRYAVGELLT AVEQHRVTRL PAVPPVVVQM ARSCRAGLAG GRGLRSLKEV ICSGAPIARE QLERFVECFP GTTVSQKLTR INLTTFSTSL CDLSACLCSI
301: VQIESQEVNI CKADSSICYG LTETSGPITV CDGVRGRFHV SIGRLIPTME ARIADVRTGK ALPPYRRGEL CVRGPLVMQE VVVSSSEPWN PGVGYLSLGY
401: MKNEEATSLA IDREGWLHTG DLCYIDKRGL VYVVDRIKEL IKYKAYQVSP AELEEVLSTH PDVMDVAVTS YPDEEAGEIP VACVVRKPGS NVEEDDIFAF
501: MDNKVAPYKK IRKVAFVEFI PRSPSGKILR RHLKAAADRR QRREISARL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.