Factsheet for GSMUA_Achr5P19650_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
vacuole 1
mitochondrion 2
peroxisome 5
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	33.33	71.05
GSMUA_Achr8P14210_001	Banana	peroxisome	72.02	70.56
KRH25085	Soybean	peroxisome	42.18	67.21
KXG40154	Sorghum	peroxisome	67.9	59.67
Zm00001d027711_P003	Maize	extracellular	66.87	58.56
Os03t0152400-01	Rice	plasma membrane	65.64	57.79
TraesCS4D01G268400.1	Wheat	peroxisome	64.61	57.4
TraesCS4A01G036200.1	Wheat	peroxisome	64.81	57.38
Zm00001d033055_P001	Maize	peroxisome	63.99	56.55
TraesCS4B01G269200.1	Wheat	peroxisome	64.4	56.4
OQU91476	Sorghum	peroxisome	63.99	55.83
Solyc11g069050.1.1	Tomato	peroxisome	60.49	54.65
PGSC0003DMT400020978	Potato	peroxisome	60.7	54.53
VIT_08s0007g05050.t01	Wine grape	plastid	59.26	54.34
VIT_06s0061g00450.t01	Wine grape	peroxisome	60.7	54.23
CDY46376	Canola	peroxisome	59.88	53.99
KRH22842	Soybean	peroxisome, plastid	59.88	53.89
AT4G05160.1	Thale cress	peroxisome	60.29	53.86
CDY46375	Canola	peroxisome	59.47	53.32
CDY39155	Canola	peroxisome	59.26	53.14
Bra029561.1-P	Field mustard	peroxisome	59.26	53.14
CDY39153	Canola	peroxisome	58.85	53.06
KRH30593	Soybean	peroxisome	59.26	51.61
Bra029560.1-P	Field mustard	peroxisome	51.23	46.63
GSMUA_Achr9P07820_001	Banana	peroxisome	15.64	41.76
GSMUA_AchrUn_...	Banana	peroxisome	40.33	39.92
GSMUA_Achr8P13230_001	Banana	peroxisome	41.15	39.76
GSMUA_Achr9P22840_001	Banana	peroxisome	30.45	38.74
GSMUA_Achr5P25570_001	Banana	peroxisome	43.0	37.86
GSMUA_AchrUn_...	Banana	peroxisome	39.3	36.87
GSMUA_Achr7P05070_001	Banana	peroxisome	37.24	36.71
GSMUA_Achr11P...	Banana	peroxisome, plasma membrane	25.51	36.47
HORVU4Hr1G072150.1	Barley	peroxisome	41.56	36.27
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	40.12	36.25
GSMUA_Achr11P...	Banana	peroxisome, plastid	39.71	36.21
GSMUA_Achr11P...	Banana	peroxisome	40.33	36.03
GSMUA_Achr1P23450_001	Banana	peroxisome	38.27	35.77
GSMUA_Achr4P12590_001	Banana	peroxisome	35.39	35.17
GSMUA_Achr1P13470_001	Banana	peroxisome	36.63	34.5
GSMUA_Achr4P05820_001	Banana	peroxisome	36.83	34.29
GSMUA_Achr6P36020_001	Banana	peroxisome	34.36	33.74
GSMUA_AchrUn_...	Banana	peroxisome	37.86	33.52

Protein Annotations

EnsemblPlants:GSMUA_Achr5P19650_001	EnsemblPlants:GSMUA_Achr5T19650_001	EnsemblPlantsGene:GSMUA_Achr5G19650_001	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
PANTHER:PTHR24096	PANTHER:PTHR24096:SF302	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SUPFAM:SSF56801
UniParc:UPI000295FD2D	UniProt:M0SZZ4	MapMan:35.1	:	:	:

Description

4-coumarate--CoA ligase-like 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G19650_001]

Coordinates

chr5:-:21290959..21295631

Molecular Weight (calculated)

52956.3 Da

IEP (calculated)

8.536

GRAVY (calculated)

0.026

Length

486 amino acids

Sequence
(BLAST)

001: MRKSERRSAR TMQVKSGYGS DGVYRSLRAH IAFPDDPDLS MVPFFFRRAV AYPDRLALAD ADTGASLSFQ ALRSAVLSAA AGFSSLCGIR KGDVVLMFAP
101: NSLHFPTPVT FFDDLVANSD PAGFSPPPVY QSDVAALLYS SGTTGTSKGV VLTHRNFICT AMMMTADQDF RGEGQNTFLC FLPMFHAAGL SPITYAQMQR
201: GNSIVSMSRF DMEAMLRAIE KYRVTHFYCA PPVMIALAKQ GKVTKYDLSS VRLVGSGAAP LGKDMMEIVA NNLPHADIVQ VYGMTETCGL ISLEIPAPGE
301: VRDFGSVGTM VSGMEAKVVS VDTLKPLPPN QLGELCFRGP NIMQGYINNP QATNLTLKDG WLHTGDLGYF DEKGQLFVVD RIKELIKYKG HQVAPAELEG
401: LLLSHPEILD AVVIPFPNAE AGEVPIAYVV RSPNSSLTEE DVQNFISKLV APIKRLRRVT FVNSVPKSAA GKILRRVLIE KARSKL

Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)

001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM

Arabidopsis Description

4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.