Factsheet for Zm00001d027711_P003

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

peroxisome 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG40154	Sorghum	peroxisome	95.68	96.02
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	33.87	82.46
Os03t0152400-01	Rice	plasma membrane	79.28	79.71
TraesCS4A01G036200.1	Wheat	peroxisome	78.74	79.6
TraesCS4D01G268400.1	Wheat	peroxisome	78.38	79.52
TraesCS4B01G269200.1	Wheat	peroxisome	79.1	79.1
Zm00001d033055_P001	Maize	peroxisome	74.95	75.64
KRH25085	Soybean	peroxisome	37.12	67.54
GSMUA_Achr5P19650_001	Banana	peroxisome	58.56	66.87
GSMUA_Achr8P14210_001	Banana	peroxisome	58.74	65.73
VIT_08s0007g05050.t01	Wine grape	plastid	58.02	60.75
VIT_06s0061g00450.t01	Wine grape	peroxisome	58.56	59.74
KRH22842	Soybean	peroxisome, plastid	57.3	58.89
PGSC0003DMT400020978	Potato	peroxisome	57.12	58.6
AT4G05160.1	Thale cress	peroxisome	57.3	58.46
Solyc11g069050.1.1	Tomato	peroxisome	56.58	58.36
CDY39155	Canola	peroxisome	56.76	58.12
Bra029561.1-P	Field mustard	peroxisome	56.58	57.93
CDY46375	Canola	peroxisome	56.4	57.75
KRH30593	Soybean	peroxisome	57.48	57.17
CDY46376	Canola	peroxisome	55.5	57.14
CDY39153	Canola	peroxisome	54.41	56.03
Bra029560.1-P	Field mustard	peroxisome	48.11	50.0
Zm00001d027519_P001	Maize	plasma membrane	41.98	42.29
HORVU4Hr1G072150.1	Barley	peroxisome	42.34	42.19
Zm00001d032103_P001	Maize	peroxisome	39.82	39.82
Zm00001d050224_P002	Maize	peroxisome	39.28	38.93
Zm00001d015459_P003	Maize	peroxisome	38.74	36.63
Zm00001d019957_P002	Maize	peroxisome	37.48	36.56
Zm00001d003702_P001	Maize	plastid	39.46	35.9
Zm00001d012144_P001	Maize	plastid	25.77	34.88
Zm00001d018660_P001	Maize	peroxisome	35.14	34.64
Zm00001d046915_P001	Maize	extracellular	39.82	34.59
Zm00001d051529_P001	Maize	peroxisome, plasma membrane	39.28	34.38
Zm00001d030132_P002	Maize	peroxisome	39.28	34.28
Zm00001d039274_P003	Maize	peroxisome	38.92	21.43

Protein Annotations

EntrezGene:100191850	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	UniProt:A0A096S078	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016874	ProteinID:ONL93740.1	ProteinID:ONL93741.1
PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF305	SUPFAM:SSF56801
TMHMM:TMhelix	UniParc:UPI0001B325EA	EnsemblPlantsGene:Zm00001d027711	EnsemblPlants:Zm00001d027711_P003	EnsemblPlants:Zm00001d027711_T003	SEG:seg

Description

4-coumarate--CoA ligase-like 7

Coordinates

chr1:-:11719874..11725095

Molecular Weight (calculated)

59459.9 Da

IEP (calculated)

7.401

GRAVY (calculated)

0.160

Length

555 amino acids

Sequence
(BLAST)

001: MARTAAPAAG YGEDGVYRSP RPAVRIESDT GLSLNDLLFR RADVCPSALA LVDSATGQSL TFAAFRSAVL TTAVALSSRA GVRRGDVVLF FAPNCFLYPV
101: CFFAVTALGA VATTANPLYT PREVAKQATD SRAKLAITVS ELLPKIVDLG FPTILLDGGG DGDAASAAAS KPQGASVTLY SDLVSGARET EYRRPPTKQS
201: DTTALMYSSG TTGASKGVIL THRNFISAAA MMTADQDALG EGPNVFLCFL PMFHIFGLSV ITFAQMQRGN SVVVMSRFDM DSVMAAVQRH RVTHLFCVPP
301: VMIALAKLGS VGKYDLSSLR FIGSGAAPLG KDVMEGVAKN FPEAVIAQGY GMTETCGIIS LEYPEKGQIR QFGSTGALVS GVEAKIVDVE TLICLPPNQL
401: GEICVRGPNI MQGYFNNVQA TEFTIKQGWL HTGDIGYFDE GGQLFVVDRL KELIKYKGFQ IAPAELEGLL LSHPEILDAV VIPFPDAEAG EVPIAYVVRS
501: SESSLTEVDV QKFIEKQVAY YKKLRRVTFV DSVPKSASGK ILRRELISKV RSSKL

Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)

001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM

Arabidopsis Description

4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.