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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • peroxisome 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:mitochondrion, peroxisome
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES15085 Sorghum peroxisome 93.51 94.02
TraesCS2B01G171200.1 Wheat peroxisome 83.24 85.56
Os08t0448000-01 Rice peroxisome 83.06 85.53
TraesCS2D01G150400.1 Wheat peroxisome 82.7 85.0
TraesCS2A01G145800.1 Wheat peroxisome 82.34 84.32
GSMUA_Achr9P22840_001 Banana peroxisome 48.11 69.9
GSMUA_Achr4P12590_001 Banana peroxisome 61.08 69.33
GSMUA_Achr4P05820_001 Banana peroxisome 64.86 68.97
GSMUA_AchrUn_... Banana peroxisome 63.06 67.57
GSMUA_Achr7P05070_001 Banana peroxisome 60.0 67.55
CDY53918 Canola peroxisome 22.7 67.38
GSMUA_Achr1P23450_001 Banana peroxisome 63.06 67.31
CDY32418 Canola peroxisome 21.8 66.12
Solyc03g117870.2.1 Tomato plastid 61.8 62.94
PGSC0003DMT400074444 Potato peroxisome 61.44 62.8
VIT_11s0052g01090.t01 Wine grape peroxisome 61.8 62.59
PGSC0003DMT400036886 Potato peroxisome 61.26 62.39
KRH02885 Soybean peroxisome 59.82 61.94
Solyc06g068650.2.1 Tomato peroxisome 60.54 61.88
KRH02884 Soybean peroxisome 60.9 61.79
Zm00001d050224_P002 Maize peroxisome 62.34 61.79
VIT_11s0052g01110.t01 Wine grape peroxisome 59.64 61.41
CDY43921 Canola peroxisome 60.54 60.98
CDY19568 Canola peroxisome 60.54 60.87
CDX87831 Canola peroxisome 60.36 60.8
Bra031266.1-P Field mustard peroxisome 60.36 60.69
Bra030429.1-P Field mustard peroxisome 60.36 60.69
AT1G51680.1 Thale cress peroxisome 60.9 60.25
KRH09616 Soybean mitochondrion, peroxisome 58.2 60.04
AT3G21240.1 Thale cress peroxisome 59.82 59.71
KRH23700 Soybean peroxisome 58.38 59.23
Zm00001d015459_P003 Maize peroxisome 62.16 58.77
PGSC0003DMT400037485 Potato peroxisome 58.02 58.76
Solyc07g008360.1.1 Tomato peroxisome 59.82 58.45
Solyc12g042460.1.1 Tomato peroxisome 57.66 58.39
PGSC0003DMT400051216 Potato peroxisome 59.82 58.14
Bra031263.1-P Field mustard peroxisome 56.76 56.96
CDY68920 Canola peroxisome 56.76 56.96
AT3G21230.1 Thale cress peroxisome 58.38 56.84
CDY06431 Canola peroxisome 56.58 56.78
KRH02886 Soybean peroxisome, plastid 57.48 56.56
CDY48875 Canola mitochondrion, plastid, vacuole 45.05 56.31
CDX82208 Canola peroxisome 57.84 56.12
Bra031265.1-P Field mustard peroxisome 56.22 55.81
Bra001819.1-P Field mustard peroxisome 57.66 55.75
CDY32416 Canola peroxisome 57.66 55.75
CDY19570 Canola peroxisome 56.04 55.64
Zm00001d046915_P001 Maize extracellular 63.78 55.4
Bra001820.1-P Field mustard peroxisome 56.22 53.33
KRH19011 Soybean peroxisome 53.69 53.02
Zm00001d051529_P001 Maize peroxisome, plasma membrane 58.02 50.79
CDY71190 Canola peroxisome 30.63 45.95
HORVU0Hr1G002720.3 Barley mitochondrion, plastid 44.86 45.6
CDY65966 Canola peroxisome 28.65 45.04
CDY06435 Canola vacuole 35.32 44.04
Zm00001d033055_P001 Maize peroxisome 40.0 40.36
Zm00001d027711_P003 Maize extracellular 39.82 39.82
Zm00001d027519_P001 Maize plasma membrane 36.58 36.84
Zm00001d003702_P001 Maize plastid 36.94 33.61
Zm00001d018660_P001 Maize peroxisome 32.97 32.5
Zm00001d030132_P002 Maize peroxisome 36.76 32.08
Zm00001d019957_P002 Maize peroxisome 30.81 30.05
Zm00001d012144_P001 Maize plastid 21.08 28.54
Zm00001d039274_P003 Maize peroxisome 36.76 20.24
Protein Annotations
Gene3D:3.30.300.30Gene3D:3.40.50.12780MapMan:7.8.1.1MapMan:9.2.1.3UniProt:A0A1D6KNK6InterPro:AMP-bd_C
InterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigGO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0016874ProteinID:ONM04397.1PFAM:PF00501PFAM:PF13193ScanProsite:PS00455PANTHER:PTHR24096
PANTHER:PTHR24096:SF244SUPFAM:SSF56801UniParc:UPI000844068CEnsemblPlantsGene:Zm00001d032103EnsemblPlants:Zm00001d032103_P001EnsemblPlants:Zm00001d032103_T001
SEG:seg:::::
Description
GRMZM2G0485224-coumarate--CoA ligase 1
Coordinates
chr1:+:213126776..213129233
Molecular Weight (calculated)
58831.6 Da
IEP (calculated)
6.246
GRAVY (calculated)
0.199
Length
555 amino acids
Sequence
(BLAST)
001: MVSPTEPQAE TTVFRSTLPD IAIPDHLPLH DYVLERLAER RDRACLIDGA TGETLTFGDV DRLSRRVAAG MRACLGVRSG GTVMLLLPNS VEFALAFLAC
101: SRLGAAATTA NPLHTPPEIA KQAAASGATV VITEPAFVGK VRGLAGVAVV ATGDGAEGCV SFSDLASSAD DGSAALPEAA AAATAIDVAN DVVALPYSSG
201: TTGLPKGVML SHRGLVTSVA QLVDGDNPNL YFREDDVVLC VLPMFHVYSL HSILLCGMRA GAALVIMKRF DTLRMFELVK RHGITIVPLV LPIAVEMVKS
301: DAIDRHDLSS VRMVISGAAP MGKELQDLLR AKLPRAVLGQ GYGMTEAGPV LSMCMAFAKE PLPVKSGACG TVVRNAELKI IDPETGLSLH RNQPGEICIR
401: GKQLMKGYLN NPEATAKTID SEGWLHTGDI GYVDDGDEIF IVDRLKELIK YKGFQVAPAE LEAMLIAHPS IADAAVVQMK DDSCGEIPVA FVVASGGSGI
501: TEDEIKQYVA KQVVFYKRLH KIFFVEAIPK APSGKILRKD LRAKLASGFS NGSSC
Best Arabidopsis Sequence Match ( AT1G51680.1 )
(BLAST)
001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L
Arabidopsis Description
4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.