Factsheet for Zm00001d051529_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plasma membrane

Predictor Summary:

peroxisome 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05680	Sorghum	peroxisome	78.55	87.99
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	72.08	80.46
Os02t0697400-01	Rice	plasma membrane	71.29	79.44
TraesCS6B01G294100.1	Wheat	peroxisome	71.77	79.41
TraesCS6A01G266700.1	Wheat	peroxisome	71.77	79.41
HORVU0Hr1G018190.2	Barley	peroxisome	70.35	78.38
GSMUA_Achr11P...	Banana	peroxisome, plastid	58.83	69.98
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	58.2	68.59
VIT_16s0039g02040.t01	Wine grape	peroxisome	58.2	67.34
Bra004109.1-P	Field mustard	peroxisome	55.52	63.31
CDY07442	Canola	peroxisome	55.52	63.31
CDY39293	Canola	peroxisome	55.36	63.02
AT1G65060.1	Thale cress	peroxisome	55.2	62.39
KRH77759	Soybean	peroxisome	54.57	62.34
PGSC0003DMT400008182	Potato	peroxisome	54.89	61.16
KRH29003	Soybean	plastid	54.26	60.99
Solyc03g097030.2.1	Tomato	peroxisome	54.42	60.53
KRH27719	Soybean	peroxisome	49.68	58.44
Zm00001d032103_P001	Maize	peroxisome	50.79	58.02
Zm00001d050224_P002	Maize	peroxisome	47.48	53.75
Zm00001d015459_P003	Maize	peroxisome	49.68	53.66
Zm00001d046915_P001	Maize	extracellular	52.05	51.64
Zm00001d033055_P001	Maize	peroxisome	34.38	39.64
Zm00001d027711_P003	Maize	extracellular	34.38	39.28
Zm00001d027519_P001	Maize	plasma membrane	29.97	34.48
Zm00001d003702_P001	Maize	plastid	32.33	33.61
Zm00001d018660_P001	Maize	peroxisome	29.65	33.39
Zm00001d019957_P002	Maize	peroxisome	26.97	30.05
Zm00001d030132_P002	Maize	peroxisome	29.65	29.56
Zm00001d012144_P001	Maize	plastid	17.19	26.59
Zm00001d039274_P003	Maize	peroxisome	31.7	19.94

Protein Annotations

EntrezGene:103653944	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	UniProt:A0A1D6Q7M3	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ProteinID:AQK54461.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016874	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096
PANTHER:PTHR24096:SF169	SUPFAM:SSF56801	UniParc:UPI000844CE63	EnsemblPlantsGene:Zm00001d051529	EnsemblPlants:Zm00001d051529_P001	EnsemblPlants:Zm00001d051529_T001
SEG:seg	:	:	:	:	:

Description

Putative AMP-dependent synthetase and ligase superfamily protein

Coordinates

chr4:-:161594500..161598787

Molecular Weight (calculated)

66897.8 Da

IEP (calculated)

6.447

GRAVY (calculated)

0.159

Length

634 amino acids

Sequence
(BLAST)

001: MITVAAPEAQ PQVAAAAAVA APEETVFRSK LPDIDIPTHL PLHDYCFSRA AEAAGAPCLI AAATGRTYTY AETRLLCRKA AACLHGLGVA QGDRVMLLLQ
101: NSVEFVLAFF GASFLGAVTT AANPFCTPQE IHKQFSASGA KVVVTHSAYV AKLRHGAFPR IGTVSGGGVD GNALLTVLTI DGDAADTPEG CLAFWELLTS
201: GDGDALPEVS ISPDDPVALP FSSGTTGLPK GVVLTHGGQV TNVAQQVDGA NPNLYMREGD VALCVLPLFH IFSLNSVLLC AMRAGAAVML MPKFEMGAML
301: EGIQRWRVTV AAVVPPLVLA LAKNPALENQ IATRSPAWVP GTENRQPVTT PGPLVPPTYR YTTLPTTQIV FVPCGRPDTP LHPRSRRQTA LFLRDFGGAG
401: PGGSVTVTVT RDADCLARAV PVQGYGMTEA GPVLSMCPAF AKEPAPAKPG SCGTVVRNAE LKVVDPDTGL SLGRNLPGEI CIRGPQIMKG YLNDPEATAR
501: TIDVHGWLHT GDIGYVDDDD EVFIVDRVKE LIKFKGFQVP PAELEALLVA HPSIADAAVV PQKDEAAGEV PVAFVVRAAD ADIAEDAIKE FISKQVVFYK
601: RLHKVYFTPS IPKSASGKIL RRELRAKLAA AATA

Best Arabidopsis Sequence Match ( AT1G51680.1 )
(BLAST)

001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L

Arabidopsis Description

4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.