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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • peroxisome 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, peroxisome
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
 extracellular: 20408568
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER90150 Sorghum peroxisome 83.72 96.05
TraesCS7A01G496200.1 Wheat peroxisome 74.65 85.64
Os06t0656500-01 Rice peroxisome 74.8 85.51
TraesCS7D01G483400.1 Wheat peroxisome 74.8 85.36
HORVU7Hr1G111130.3 Barley peroxisome, plastid 76.37 82.71
Zm00001d015459_P003 Maize peroxisome 70.27 76.49
GSMUA_Achr9P22840_001 Banana peroxisome 44.76 74.87
GSMUA_Achr1P23450_001 Banana peroxisome 60.25 74.04
GSMUA_AchrUn_... Banana peroxisome 59.78 73.75
GSMUA_Achr4P12590_001 Banana peroxisome 56.34 73.62
GSMUA_Achr4P05820_001 Banana peroxisome 59.62 72.99
GSMUA_Achr7P05070_001 Banana peroxisome 56.18 72.82
CDY53918 Canola peroxisome 20.66 70.59
CDY32418 Canola peroxisome 19.87 69.4
VIT_11s0052g01090.t01 Wine grape peroxisome 57.59 67.15
Solyc06g068650.2.1 Tomato peroxisome 56.49 66.48
Solyc03g117870.2.1 Tomato plastid 56.49 66.24
PGSC0003DMT400074444 Potato peroxisome 56.18 66.11
PGSC0003DMT400036886 Potato peroxisome 56.34 66.06
KRH02884 Soybean peroxisome 56.34 65.81
VIT_11s0052g01110.t01 Wine grape peroxisome 55.24 65.49
KRH02885 Soybean peroxisome 54.62 65.11
CDY19568 Canola peroxisome 55.56 64.31
Zm00001d050224_P002 Maize peroxisome 56.34 64.29
Bra031266.1-P Field mustard peroxisome 55.4 64.13
AT1G51680.1 Thale cress peroxisome 56.18 63.99
Zm00001d032103_P001 Maize peroxisome 55.4 63.78
CDY43921 Canola peroxisome 54.93 63.7
CDX87831 Canola peroxisome 54.93 63.7
AT3G21240.1 Thale cress peroxisome 55.4 63.67
KRH09616 Soybean mitochondrion, peroxisome 53.52 63.57
Bra030429.1-P Field mustard peroxisome 54.77 63.41
KRH23700 Soybean peroxisome 53.99 63.07
PGSC0003DMT400051216 Potato peroxisome 55.71 62.35
Solyc07g008360.1.1 Tomato peroxisome 54.77 61.62
Solyc12g042460.1.1 Tomato peroxisome 51.64 60.22
PGSC0003DMT400037485 Potato peroxisome 51.33 59.85
KRH02886 Soybean peroxisome, plastid 51.64 58.51
CDY48875 Canola mitochondrion, plastid, vacuole 39.75 57.21
CDY19570 Canola peroxisome 48.67 55.64
Bra031265.1-P Field mustard peroxisome 48.51 55.46
CDY06431 Canola peroxisome 47.42 54.79
AT3G21230.1 Thale cress peroxisome 48.83 54.74
CDY68920 Canola peroxisome 47.1 54.43
Bra031263.1-P Field mustard peroxisome 47.1 54.43
CDX82208 Canola peroxisome 48.51 54.2
KRH19011 Soybean peroxisome 47.42 53.91
Bra001819.1-P Field mustard peroxisome 48.36 53.83
CDY32416 Canola peroxisome 48.04 53.48
Bra001820.1-P Field mustard peroxisome 48.83 53.33
Zm00001d051529_P001 Maize peroxisome, plasma membrane 51.64 52.05
CDY06435 Canola vacuole 32.86 47.19
CDY71190 Canola peroxisome 25.2 43.51
CDY65966 Canola peroxisome 23.63 42.78
Zm00001d027711_P003 Maize extracellular 34.59 39.82
Zm00001d033055_P001 Maize peroxisome 34.27 39.82
Zm00001d027519_P001 Maize plasma membrane 32.39 37.57
Zm00001d018660_P001 Maize peroxisome 30.83 34.99
Zm00001d003702_P001 Maize plastid 33.18 34.75
Zm00001d030132_P002 Maize peroxisome 31.46 31.6
Zm00001d019957_P002 Maize peroxisome 27.86 31.28
Zm00001d012144_P001 Maize plastid 18.15 28.29
Zm00001d039274_P003 Maize peroxisome 34.59 21.92
Protein Annotations
Gene3D:3.30.300.30Gene3D:3.40.50.12780MapMan:7.8.1.1MapMan:9.2.1.3InterPro:AMP-bd_CInterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/LigProteinID:AQL05182.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0016874UniProt:K7VBT8PFAM:PF00501PFAM:PF13193ScanProsite:PS00455PANTHER:PTHR24096
PANTHER:PTHR24096:SF149SUPFAM:SSF56801UniParc:UPI000221FAE9EnsemblPlantsGene:Zm00001d046915EnsemblPlants:Zm00001d046915_P001EnsemblPlants:Zm00001d046915_T001
SEG:seg:::::
Description
Putative AMP-dependent synthetase and ligase superfamily protein
Coordinates
chr9:+:110360513..110367095
Molecular Weight (calculated)
67693.6 Da
IEP (calculated)
5.064
GRAVY (calculated)
0.104
Length
639 amino acids
Sequence
(BLAST)
001: MPAVDTLELV TGSPTDIAAP SVICPPPTLP PRRGGIITRL PPQFRHSSAQ ASSGAEQSLE IPPTICPPAD AEPIASPAAR TMGSVAEDST AAAAAAASVV
101: FRSKLPDIEI PRNLSLQAYC FERLPEVSSR PCLIDGQTGA VHTYAEVDRL SRSAAAALRG LGVGRGDVVM ALLRNCPEFA LVFLGAARLG AATTTANPFY
201: TPHEIHRQAA AAGARVVVTE ACAVDKVRGF AAERGVPVVA VDGAFDGCLE LRALVDAAEP LAADEEVGPD DVVALPYSSG TTGMPKGVML THRSLVTSVA
301: QQVDGENPNL YFSKDDVVLC VLPLFHIYSL NSVLLAGLRA GCAIVIMRKF EIGALVELVR AHGVTVAPFV PPIVVEIAKS PRVGAADLAS IRMVMSGAAP
401: MGKDLQDAFM AKIPNAVLGQ GYGMTEAGPV LAMCLAFAKE PFEVKSGSCG TVVRNAELKI VDPDTSASLG RNQPGEICIR GEQIMKGYLN DPEATKNTID
501: KDGWLHTGDI GYVDDDDEIF IVDRLKEIIK YKGFQVPPAE LEALLITHPE IKDAAVVSMK DEVAGEVPVA FIIRSEGSEI SENEIKQFVA KEVVFYKRIN
601: RVFFTDSIPK NPSGKILRKD LRARLAAGIP SSDNTQSKS
Best Arabidopsis Sequence Match ( AT3G21240.1 )
(BLAST)
001: MTTQDVIVND QNDQKQCSND VIFRSRLPDI YIPNHLPLHD YIFENISEFA AKPCLINGPT GEVYTYADVH VTSRKLAAGL HNLGVKQHDV VMILLPNSPE
101: VVLTFLAASF IGAITTSANP FFTPAEISKQ AKASAAKLIV TQSRYVDKIK NLQNDGVLIV TTDSDAIPEN CLRFSELTQS EEPRVDSIPE KISPEDVVAL
201: PFSSGTTGLP KGVMLTHKGL VTSVAQQVDG ENPNLYFNRD DVILCVLPMF HIYALNSIML CSLRVGATIL IMPKFEITLL LEQIQRCKVT VAMVVPPIVL
301: AIAKSPETEK YDLSSVRMVK SGAAPLGKEL EDAISAKFPN AKLGQGYGMT EAGPVLAMSL GFAKEPFPVK SGACGTVVRN AEMKILDPDT GDSLPRNKPG
401: EICIRGNQIM KGYLNDPLAT ASTIDKDGWL HTGDVGFIDD DDELFIVDRL KELIKYKGFQ VAPAELESLL IGHPEINDVA VVAMKEEDAG EVPVAFVVRS
501: KDSNISEDEI KQFVSKQVVF YKRINKVFFT DSIPKAPSGK ILRKDLRARL ANGLMN
Arabidopsis Description
4CL2Cinnamyl alcohol dehydrogenase [Source:UniProtKB/TrEMBL;Acc:B1GUZ3]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.