Factsheet for Zm00001d012144_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0901500-01	Rice	plastid	78.54	72.85
EES01913	Sorghum	peroxisome, plastid	91.46	67.57
TraesCS3A01G394300.1	Wheat	peroxisome	80.98	59.29
TraesCS3D01G388100.1	Wheat	peroxisome	81.22	59.25
TraesCS3B01G426300.1	Wheat	peroxisome	80.98	59.07
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	80.98	56.66
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	76.1	55.91
TraesCS3B01G426200.1	Wheat	peroxisome, plastid	75.61	55.36
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	76.83	52.85
GSMUA_Achr5P25570_001	Banana	peroxisome	52.2	38.77
Solyc03g111170.2.1	Tomato	nucleus	48.05	35.69
PGSC0003DMT400039281	Potato	peroxisome	48.05	35.69
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	47.8	35.64
CDY45730	Canola	vacuole	38.78	34.64
CDY71478	Canola	vacuole	38.54	34.42
Bra029229.1-P	Field mustard	peroxisome	46.34	33.99
AT5G63380.1	Thale cress	peroxisome	46.59	33.99
KRH63739	Soybean	peroxisome, plastid	48.05	33.97
KRH57649	Soybean	plastid	22.68	33.21
KRH54211	Soybean	peroxisome	48.29	33.17
Zm00001d019957_P002	Maize	peroxisome	45.85	33.04
VIT_14s0171g00300.t01	Wine grape	peroxisome	43.66	32.97
Zm00001d018660_P001	Maize	peroxisome	44.88	32.68
VIT_14s0171g00290.t01	Wine grape	peroxisome	41.71	31.61
KRG94321	Soybean	cytosol, golgi, peroxisome	24.15	31.43
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	41.46	30.91
KRG94318	Soybean	peroxisome, plastid	40.49	30.68
KRH57646	Soybean	peroxisome, plastid	41.22	30.62
Zm00001d027519_P001	Maize	plasma membrane	38.05	28.31
Zm00001d033055_P001	Maize	peroxisome	35.37	26.36
Zm00001d027711_P003	Maize	extracellular	34.88	25.77
Zm00001d003702_P001	Maize	plastid	32.2	21.64
Zm00001d030132_P002	Maize	peroxisome	33.41	21.54
Zm00001d032103_P001	Maize	peroxisome	28.54	21.08
Zm00001d050224_P002	Maize	peroxisome	28.54	20.89
Zm00001d015459_P003	Maize	peroxisome	28.05	19.59
Zm00001d046915_P001	Maize	extracellular	28.29	18.15
Zm00001d051529_P001	Maize	peroxisome, plasma membrane	26.59	17.19
Zm00001d039274_P003	Maize	peroxisome	31.71	12.9
CDY45731	Canola	peroxisome	0.49	1.3

Protein Annotations

EnsemblPlants:Zm00001d012144_P001	EnsemblPlants:Zm00001d012144_T001	EnsemblPlantsGene:Zm00001d012144	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016874	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ncoils:Coil
PANTHER:PTHR24096	PANTHER:PTHR24096:SF251	PFAM:PF00501	ProteinID:AQK98930.1	ScanProsite:PS00455	SEG:seg
SUPFAM:SSF56801	UniParc:UPI00084324B8	UniProt:A0A1D6G6W4	MapMan:35.1	:	:

Description

4-coumarate--CoA ligase-like 9

Coordinates

chr8:-:168855687..168867132

Molecular Weight (calculated)

42725.0 Da

IEP (calculated)

8.600

GRAVY (calculated)

0.312

Length

410 amino acids

Sequence
(BLAST)

001: MAAPRPSGGM DPRSGFCAAT RTFHSLRPSA ALPPDSLPAT AAAYAFSILS SPLPDRPALV DAATSISVSY PSFLAAVRSL AGGLWSVLGL RPGDVVLVVS
101: PSRIDVPVID FALMSIGAVV SPANPASTAE EYTHMVALSR PVVALAAPEV AAKLPRNLRC VVIGSNEYKS LSSAGGVAPS PPVAVKQSDT AAVLYSSGTT
201: GRVKAAAVSH RNLIAVISAH RNNRVIAEKE AAEAGEEPLP PTVTLFPLPL FHVFGFMMLL RSVAMGETAV LMDRFDFIAA LRAIERYRVT LLPAAPPVLV
301: AMIKSEEARR CDLSSLLFIG IGGAPLGREV AERFAAIFPN IELIQGYGLT ETSGSVASTV GPDECKAYGS VGKLASHLEA KIVDPSTGEV LGPGQRGELW
401: VRGPVVMKGK

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.