CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 3
vacuole 1
peroxisome 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57646	Soybean	peroxisome, plastid	76.34	74.82
VIT_14s0171g00300.t01	Wine grape	peroxisome	57.86	57.64
VIT_14s0171g00290.t01	Wine grape	peroxisome	53.97	53.97
KRH57649	Soybean	plastid	27.73	53.57
GSMUA_Achr5P25570_001	Banana	peroxisome	51.76	50.72
KRH25085	Soybean	peroxisome	28.28	50.16
KRG94321	Soybean	cytosol, golgi, peroxisome	28.84	49.52
KRG92118	Soybean	peroxisome	14.6	49.38
KRH63739	Soybean	peroxisome, plastid	52.87	49.31
EES01913	Sorghum	peroxisome, plastid	49.54	48.29
TraesCS3B01G426300.1	Wheat	peroxisome	50.09	48.22
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	49.72	48.21
KRH63132	Soybean	vacuole	25.32	48.07
TraesCS3A01G394300.1	Wheat	peroxisome	49.72	48.04
TraesCS3D01G388100.1	Wheat	peroxisome	49.35	47.51
KRH54211	Soybean	peroxisome	51.76	46.9
EER97853	Sorghum	peroxisome, plastid	47.87	46.84
TraesCS3B01G426200.1	Wheat	peroxisome, plastid	48.43	46.79
TraesCS4B01G075900.1	Wheat	plastid	46.95	46.78
TraesCS4A01G239100.2	Wheat	plastid	46.95	46.78
TraesCS4D01G074500.1	Wheat	plastid	46.58	46.41
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	49.91	46.08
KRH17509	Soybean	peroxisome, plastid	46.21	45.54
GSMUA_Achr1P13470_001	Banana	peroxisome	43.25	45.35
Os01t0901600-01	Rice	peroxisome, plastid	50.09	45.32
HORVU4Hr1G012660.1	Barley	peroxisome	44.92	44.92
TraesCS4A01G239000.1	Wheat	peroxisome	45.29	44.46
TraesCS4D01G074700.1	Wheat	peroxisome	44.73	44.32
TraesCS4D01G074600.1	Wheat	peroxisome	45.1	44.28
Zm00001d018660_P001	Maize	peroxisome	46.03	44.23
HORVU4Hr1G012680.8	Barley	peroxisome	45.47	44.17
HORVU4Hr1G012630.3	Barley	peroxisome	46.77	44.08
TraesCS4B01G076100.1	Wheat	peroxisome	44.18	44.01
TraesCS3B01G515400.1	Wheat	peroxisome	44.36	43.64
Os07t0280200-01	Rice	peroxisome	44.92	43.55
TraesCS4B01G076000.1	Wheat	peroxisome	44.18	43.38
TraesCS3A01G472200.1	Wheat	peroxisome	43.99	43.27
KXG38162	Sorghum	peroxisome	44.92	43.16
EER98656	Sorghum	peroxisome, plastid	44.18	43.06
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	47.32	42.95
TraesCS3D01G468000.1	Wheat	peroxisome	43.62	42.6
TraesCS5D01G561500.1	Wheat	peroxisome	43.62	42.52
TraesCS5B01G570100.1	Wheat	peroxisome	43.44	42.42
OQU88316	Sorghum	peroxisome, plastid	46.77	42.31
Os01t0901500-01	Rice	plastid	34.57	42.31
Zm00001d019957_P002	Maize	peroxisome	43.81	41.65
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	43.99	41.03
KRH30593	Soybean	peroxisome	42.14	40.86
Zm00001d012144_P001	Maize	plastid	30.68	40.49
KRH34673	Soybean	peroxisome	42.51	40.35
KRH34672	Soybean	peroxisome	42.51	40.35
KRG92119	Soybean	peroxisome	41.96	39.89
KRH22842	Soybean	peroxisome, plastid	39.74	39.81
KRH74284	Soybean	peroxisome	37.89	37.07
TraesCS4A01G238800.1	Wheat	plastid	29.39	36.81
KRH02885	Soybean	peroxisome	34.94	35.26
KRH09616	Soybean	mitochondrion, peroxisome	34.38	34.57
KRH02884	Soybean	peroxisome	34.94	34.55
KRH23700	Soybean	peroxisome	34.57	34.19
KRH29003	Soybean	plastid	34.94	33.51
KRG98485	Soybean	peroxisome	33.46	32.73
KRH02886	Soybean	peroxisome, plastid	34.01	32.62
KRH46374	Soybean	peroxisome	33.27	32.55
KRH39635	Soybean	cytosol, golgi, peroxisome	29.94	32.53
KRH77759	Soybean	peroxisome	32.72	31.89
KRH27719	Soybean	peroxisome	30.13	30.24
KRH19011	Soybean	peroxisome	30.87	29.72

Protein Annotations

EntrezGene:100801143	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	EMBL:ACUP02011928	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:GLYMA_19G075800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	UniProt:I1N7E7	EnsemblPlants:KRG94318
ProteinID:KRG94318	ProteinID:KRG94318.1	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096
PANTHER:PTHR24096:SF160	SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI000233F177	SEG:seg	:

Description

hypothetical protein

Coordinates

chr19:-:27389005..27398795

Molecular Weight (calculated)

59471.1 Da

IEP (calculated)

9.112

GRAVY (calculated)

0.037

Length

541 amino acids

Sequence
(BLAST)

001: MDERKRIDPR SGFNRASRIF HSLKPPLPLP PPNATFSATT YALSLRRNSL FPDSTTALID ATTGHRLSHY EVINRIETLA NNFTSILKLS KGDTALILSP
101: NLIQVPILCF ALLSLGVVVS PANPISTRSD LTRFFHLSKP AIVFTVTSVV EKTQDFHVRT VLLDSPEFDS LTKTRIQIHP PSPLVSPVTQ SDVAAILYSS
201: GTTGMMKGVV MTHRNLTALA AGYDAVRVNR KYPAVFFFTM PFFHVYGFTL SFRAMVLSET VVIMERFSLR GMLSAVERFG VTHLAVVPPL MVALTKDSVT
301: NGYDLKTLEG VTCGSSPLGK ETAEAFKAKF PNVMILQGYG LTESTAGVAR TSPEDANRAG TTGRLVSGVE AKIVNPNTGE AMFPCEQGEL WIKSPSIMKG
401: YVGDPEATSA TLVDGWLRTG DLCYFDNEGF LYVVDRLKEL IKYKGYQVAP AELEQYLLSH PEINDAAVIP YPDEEAGQVP MAFVVRQPQS SLSEIEIIDF
501: VAKQVAPYKK IRRVAFVDSI PKNALGKILR KDLNKLALSR L

Best Arabidopsis Sequence Match ( AT1G20500.1 )
(BLAST)

001: MAYPERSLIV DPRSGFCKSN STFYSKRQPL SLPPNLSRDV TTFISSQPHR GKTAFIDAAT GQCLTFSDLW RAVDRVADCL YHEVGIRRGD VVLILSPNSI
101: FIPVVCLSVM SLGAVFTTAN TLNTSGEISK QIADSNPTLV FTTRQLAPKL PVAISVVLTD DEVYQELTSA IRVVGILSEM VKKEPSGQRV RDRVNQDDTA
201: MMLYSSGTTG PSKGVISSHR NLTAHVARFI SDNLKRDDIF ICTVPMFHTY GLLTFAMGTV ALGSTVVILR RFQLHDMMDA VEKHRATALA LAPPVLVAMI
301: NDADLIKAKY DLSSLKTVRC GGAPLSKEVT EGFLEKYPTV DILQGYALTE SNGGGAFTNS AEESRRYGTA GTLTSDVEAR IVDPNTGRFM GINQTGELWL
401: KGPSISKGYF KNQEATNETI NLEGWLKTGD LCYIDEDGFL FVVDRLKELI KYKGYQVPPA ELEALLITHP DILDAAVIPF PDKEAGQYPM AYVVRKHESN
501: LSEKQVIDFI SKQVAPYKKI RKVSFINSIP KTASGKTLRK DLIKLATSKL

Arabidopsis Description

4CLL44-coumarate--CoA ligase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:P0C5B6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.