CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
plastid 1
peroxisome 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34672	Soybean	peroxisome	86.67	86.67
KRG92119	Soybean	peroxisome	86.32	86.47
KRH63132	Soybean	vacuole	42.63	85.26
KRG92118	Soybean	peroxisome	23.86	85.0
VIT_13s0019g05260.t01	Wine grape	peroxisome	61.23	67.64
Solyc11g007970.1.1	Tomato	peroxisome	60.88	61.42
GSMUA_AchrUn_...	Banana	peroxisome	42.63	49.49
KRH25085	Soybean	peroxisome	24.74	46.23
KRH17509	Soybean	peroxisome, plastid	43.51	45.17
KRG94318	Soybean	peroxisome, plastid	40.35	42.51
KRH22842	Soybean	peroxisome, plastid	39.65	41.85
KRH74284	Soybean	peroxisome	40.53	41.77
KRH30593	Soybean	peroxisome	40.35	41.22
KRH63739	Soybean	peroxisome, plastid	41.93	41.21
KRH57646	Soybean	peroxisome, plastid	39.65	40.94
KRH54211	Soybean	peroxisome	41.23	39.36
KRH39635	Soybean	cytosol, golgi, peroxisome	34.04	38.96
KRH09616	Soybean	mitochondrion, peroxisome	35.09	37.17
KRH23700	Soybean	peroxisome	35.09	36.56
KRH46374	Soybean	peroxisome	34.74	35.8
KRG98485	Soybean	peroxisome	34.56	35.62
KRH02885	Soybean	peroxisome	32.98	35.07
KRH77759	Soybean	peroxisome	33.86	34.77
KRH02884	Soybean	peroxisome	32.98	34.37
KRH29003	Soybean	plastid	33.51	33.87
KRH27719	Soybean	peroxisome	31.93	33.77
KRH02886	Soybean	peroxisome, plastid	32.81	33.16
KRH19011	Soybean	peroxisome	30.0	30.43
KRG94321	Soybean	cytosol, golgi, peroxisome	15.44	27.94
KRH57649	Soybean	plastid	13.68	27.86

Protein Annotations

EntrezGene:100775413	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	EMBL:ACUP02006612	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:GLYMA_10G197900	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	UniProt:I1LCM8	EnsemblPlants:KRH34673
ProteinID:KRH34673	ProteinID:KRH34673.1	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096
PANTHER:PTHR24096:SF213	SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI00023CD5F7	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:42920530..42922671

Molecular Weight (calculated)

62484.5 Da

IEP (calculated)

7.355

GRAVY (calculated)

-0.015

Length

570 amino acids

Sequence
(BLAST)

001: MSRKEERSSR KDEYNKSLPP FDTRSGYDSR TGIYHSLVKL GTKHEIPTKP DLGTANFVLS QFPQAHLAEA RIAFIDSGTN RSVSYGELRR SIYSLASALF
101: NRLKVRKGDV VFVLSPNSTL YSTICLAVLS VGAVVTTANP INTESEIAKQ VHDSGAKLAI STLEDLHKLV PTGIPTILTS RPFDGNMLSI EELIEDCYGS
201: PQLPQVPVAQ SDTAAILYSS GTTGRSKGVL LTHANIISIM RLLFWQVDVS GSQDDVFFAF IPMFHIYGMI FFGLGLLCIG ITTVLMQKYD FQAMLVAIQK
301: YKVNNLPAVP PVILALVKHS SKVKCDLSSL KRVGSGAAPL SKEVAQEFRR MFPSVELRQG YGLTESSGGA AFFASDKDAK AHPDSCGKLI PTFCAKVIDI
401: ETGKPLPPRK EGELWFKSPT IMKEYLGNME ETSATIDSEG WLRTGDLGYI DENGFVYIVE RIKELIKHNG YQVAPAELES VLLSHPLIVD AAVIPVEDEE
501: TGQIPMAYVV IAAGSELSED QVIQFVAGEV APYKKVRRVS FIDTIPKSAA GKILRKDLVS QSRHQLVSKL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.