CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63132	Soybean	vacuole	79.38	44.56
KRH34672	Soybean	peroxisome	85.62	24.04
KRG92119	Soybean	peroxisome	85.0	23.9
KRH34673	Soybean	peroxisome	85.0	23.86
KRH25085	Soybean	peroxisome	33.12	17.38
KRG94318	Soybean	peroxisome, plastid	49.38	14.6
KRH63739	Soybean	peroxisome, plastid	50.62	13.97
KRH17509	Soybean	peroxisome, plastid	47.5	13.84
KRH57646	Soybean	peroxisome, plastid	46.88	13.59
KRH54211	Soybean	peroxisome	50.0	13.4
KRH30593	Soybean	peroxisome	43.12	12.37
KRH09616	Soybean	mitochondrion, peroxisome	41.25	12.27
KRH22842	Soybean	peroxisome, plastid	41.25	12.22
KRH23700	Soybean	peroxisome	41.25	12.07
KRH46374	Soybean	peroxisome	40.0	11.57
KRH77759	Soybean	peroxisome	40.0	11.53
KRG98485	Soybean	peroxisome	39.38	11.39
KRH74284	Soybean	peroxisome	39.38	11.39
KRH19011	Soybean	peroxisome	40.0	11.39
KRH02884	Soybean	peroxisome	38.75	11.33
KRH29003	Soybean	plastid	39.38	11.17
KRH02886	Soybean	peroxisome, plastid	39.38	11.17
KRH02885	Soybean	peroxisome	36.88	11.01
KRH39635	Soybean	cytosol, golgi, peroxisome	33.12	10.64
KRH27719	Soybean	peroxisome	31.88	9.46
KRH57649	Soybean	plastid	0.0	0.0
KRG94321	Soybean	cytosol, golgi, peroxisome	0.0	0.0

Protein Annotations

EMBL:ACUP02012730	EnsemblPlants:KRG92118	EnsemblPlantsGene:GLYMA_20G192000	Gene3D:2.30.38.10	Gene3D:3.30.300.30	Gene3D:3.40.50.980
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF213	PFAM:PF00501	ProteinID:KRG92118	ProteinID:KRG92118.1	SEG:seg	SUPFAM:SSF56801
UniParc:UPI000295A6AB	UniProt:K7N4G0	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:43068931..43069492

Molecular Weight (calculated)

17719.4 Da

IEP (calculated)

6.878

GRAVY (calculated)

-0.010

Length

160 amino acids

Sequence
(BLAST)

001: MFPWVELRQG YGLTESSGGA AFFASDKDGK AHPDSCGKLI PTFCAKVIRI EMGKPFPPHK KGKLWFKSPT IMKGYLGNLE ATSATIDSEG WLRTGDLGYI
101: DENEFVYIVE RIKELIKHNG YQVAPAELES VLLSHPLIVD AAVIPCIILS HFHSHFSLSV

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.