CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
extracellular 1
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09616	Soybean	mitochondrion, peroxisome	93.97	95.54
PGSC0003DMT400036886	Potato	peroxisome	72.58	72.84
Solyc03g117870.2.1	Tomato	plastid	72.21	72.48
PGSC0003DMT400074444	Potato	peroxisome	71.66	72.19
KRH02885	Soybean	peroxisome	70.2	71.64
Solyc06g068650.2.1	Tomato	peroxisome	71.12	71.64
KRH02884	Soybean	peroxisome	70.93	70.93
GSMUA_Achr1P23450_001	Banana	peroxisome	66.36	69.81
GSMUA_Achr9P22840_001	Banana	peroxisome	48.45	69.37
GSMUA_Achr4P12590_001	Banana	peroxisome	61.97	69.33
CDX87831	Canola	peroxisome	69.65	69.15
GSMUA_AchrUn_...	Banana	peroxisome	65.45	69.11
Bra030429.1-P	Field mustard	peroxisome	69.47	68.84
PGSC0003DMT400037485	Potato	peroxisome	68.74	68.61
CDY43921	Canola	peroxisome	69.1	68.6
AT1G51680.1	Thale cress	peroxisome	70.02	68.27
GSMUA_Achr7P05070_001	Banana	peroxisome	61.24	67.95
GSMUA_Achr4P05820_001	Banana	peroxisome	64.72	67.82
Solyc12g042460.1.1	Tomato	peroxisome	67.82	67.7
CDY19568	Canola	peroxisome	67.82	67.21
AT3G21240.1	Thale cress	peroxisome	68.01	66.91
Bra031266.1-P	Field mustard	peroxisome	67.28	66.67
TraesCS6B01G179900.2	Wheat	peroxisome	62.89	62.77
TraesCS6A01G151700.1	Wheat	peroxisome	62.52	62.64
TraesCS6D01G141700.1	Wheat	peroxisome	62.71	62.48
KRH02886	Soybean	peroxisome, plastid	64.35	62.41
Os02t0177600-01	Rice	plasma membrane	62.89	62.09
Os06t0656500-01	Rice	peroxisome	63.44	62.08
EER90150	Sorghum	peroxisome	62.89	61.76
TraesCS7A01G496200.1	Wheat	peroxisome	62.71	61.58
TraesCS7D01G483400.1	Wheat	peroxisome	62.89	61.43
Os08t0448000-01	Rice	peroxisome	60.51	61.41
HORVU6Hr1G030390.2	Barley	peroxisome	61.97	61.3
TraesCS2B01G171200.1	Wheat	peroxisome	60.33	61.11
TraesCS2D01G150400.1	Wheat	peroxisome	59.96	60.74
EES04623	Sorghum	peroxisome	61.43	60.54
TraesCS2A01G145800.1	Wheat	peroxisome	59.78	60.33
KRH77759	Soybean	peroxisome	60.15	59.28
EES15085	Sorghum	peroxisome	59.41	58.88
Zm00001d032103_P001	Maize	peroxisome	59.23	58.38
KRH19011	Soybean	peroxisome	59.78	58.19
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	62.71	58.14
Zm00001d015459_P003	Maize	peroxisome	61.61	57.41
KRH29003	Soybean	plastid	57.59	55.85
Os08t0245200-01	Rice	extracellular	57.4	55.67
Zm00001d050224_P002	Maize	peroxisome	56.67	55.36
KRH27719	Soybean	peroxisome	54.3	55.1
EES13602	Sorghum	peroxisome	56.49	54.12
Zm00001d046915_P001	Maize	extracellular	63.07	53.99
CDY06435	Canola	vacuole	39.31	48.31
KRH25085	Soybean	peroxisome	25.05	44.92
KRH63132	Soybean	vacuole	22.85	43.86
KRH22842	Soybean	peroxisome, plastid	41.32	41.85
KRG92118	Soybean	peroxisome	12.07	41.25
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	40.22	40.29
KRH30593	Soybean	peroxisome	39.67	38.89
KRH17509	Soybean	peroxisome, plastid	37.84	37.7
KRH74284	Soybean	peroxisome	37.11	36.71
KRG98485	Soybean	peroxisome	36.75	36.35
KRH46374	Soybean	peroxisome	36.38	35.99
KRH34672	Soybean	peroxisome	37.11	35.61
KRG92119	Soybean	peroxisome	36.75	35.33
KRH34673	Soybean	peroxisome	36.56	35.09
KRH63739	Soybean	peroxisome, plastid	37.11	35.0
KRH57646	Soybean	peroxisome, plastid	35.1	34.78
KRG94318	Soybean	peroxisome, plastid	34.19	34.57
KRH54211	Soybean	peroxisome	36.38	33.33
KRH39635	Soybean	cytosol, golgi, peroxisome	28.52	31.33
KRH57649	Soybean	plastid	11.52	22.5
KRG94321	Soybean	cytosol, golgi, peroxisome	11.15	19.37

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	EntrezGene:547944	MapMan:7.8.1.1	MapMan:9.2.1.3	EMBL:ACUP02008482
EMBL:AF002259	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:GLYMA_13G372000	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0008152
GO:GO:0009698	GO:GO:0009987	GO:GO:0016207	GO:GO:0016874	GO:GO:0019748	EnsemblPlants:KRH23700
ProteinID:KRH23700	ProteinID:KRH23700.1	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096
PANTHER:PTHR24096:SF207	UniProt:Q8S5C1	SUPFAM:SSF56801	UniParc:UPI00000AA5A8	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:+:45701238..45704364

Molecular Weight (calculated)

60180.8 Da

IEP (calculated)

6.727

GRAVY (calculated)

-0.120

Length

547 amino acids

Sequence
(BLAST)

001: MADDGSRREL IFRSKLPDIY IPKHMPLHSY CFENLRECGS RPCLINAPTG DVYSYHEVDS TARKVARGLK KEGVEQGQVI MILLPNCPEF VFSFLGASHR
101: GAMATAANPF FTPAEIAKQA HASNAKLLIT QASYYDKVKD LRDIKLVFVD SCPPHTEEKQ HLHFSHLCED NGDADVDVDV DIKPDDVVAL PYSSGTTGLP
201: KGVMLSHKGL VTSIAQQVDG DNPNLYYHCH DTILCVLPLF HIYSLNSVLL CGLRAKATIL LMPKFDINSL LALIHKHKVT IAPVVPPIVL AISKSPDLHK
301: YDLSSIRVLK SGGAPLGKEL EDTLRAKFPN AKLGQGYGMT EAGPVLTMSL AFAKEPIDVK PGACGTVVRN AEMKIVDPET GHSLPRNQSG EICIRGDQIM
401: KGYLNDGEAT ERTIDKDGWL HTGDIGYIDD DDELFIVDRL KELIKYKGFQ VAPAELEALL LTHPKISDAA VVPMKDEAAG EVPVAFVVIS NGYTDTTEDE
501: IKQFISKQVV FYKRINRVFF IDAIPKSPSG KILRKDLRAK IAASVPK

Best Arabidopsis Sequence Match ( AT1G51680.1 )
(BLAST)

001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L

Arabidopsis Description

4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.