Factsheet for TraesCS6B01G179900.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G141700.1	Wheat	peroxisome	99.27	99.09
TraesCS6A01G151700.1	Wheat	peroxisome	97.99	98.35
HORVU6Hr1G030390.2	Barley	peroxisome	97.81	96.93
Os02t0177600-01	Rice	plasma membrane	87.23	86.28
EES04623	Sorghum	peroxisome	86.68	85.59
Zm00001d015459_P003	Maize	peroxisome	85.22	79.56
GSMUA_Achr9P22840_001	Banana	peroxisome	50.73	72.77
GSMUA_Achr4P12590_001	Banana	peroxisome	64.05	71.78
GSMUA_Achr1P23450_001	Banana	peroxisome	68.07	71.73
GSMUA_AchrUn_...	Banana	peroxisome	67.52	71.43
GSMUA_Achr7P05070_001	Banana	peroxisome	63.5	70.59
CDY53918	Canola	peroxisome	24.09	70.59
GSMUA_Achr4P05820_001	Banana	peroxisome	67.15	70.5
CDY32418	Canola	peroxisome	22.63	67.76
Solyc06g068650.2.1	Tomato	peroxisome	66.24	66.85
PGSC0003DMT400074444	Potato	peroxisome	65.88	66.48
PGSC0003DMT400036886	Potato	peroxisome	65.88	66.24
Solyc03g117870.2.1	Tomato	plastid	65.69	66.06
VIT_11s0052g01090.t01	Wine grape	peroxisome	65.88	65.88
TraesCS2B01G171200.1	Wheat	peroxisome	64.6	65.56
VIT_11s0052g01110.t01	Wine grape	peroxisome	62.96	64.01
KRH02884	Soybean	peroxisome	63.14	63.25
KRH02885	Soybean	peroxisome	61.86	63.25
CDY19568	Canola	peroxisome	63.69	63.22
KRH09616	Soybean	mitochondrion, peroxisome	62.04	63.2
Bra031266.1-P	Field mustard	peroxisome	63.5	63.04
AT3G21240.1	Thale cress	peroxisome	63.87	62.95
KRH23700	Soybean	peroxisome	62.77	62.89
CDY43921	Canola	peroxisome	62.96	62.61
CDX87831	Canola	peroxisome	62.77	62.43
AT1G51680.1	Thale cress	peroxisome	63.87	62.39
Bra030429.1-P	Field mustard	peroxisome	62.59	62.14
Solyc12g042460.1.1	Tomato	peroxisome	60.95	60.95
PGSC0003DMT400051216	Potato	peroxisome	63.14	60.6
PGSC0003DMT400037485	Potato	peroxisome	60.4	60.4
Solyc07g008360.1.1	Tomato	peroxisome	62.04	59.86
TraesCS6B01G294100.1	Wheat	peroxisome	60.77	58.12
KRH02886	Soybean	peroxisome, plastid	58.03	56.38
CDY48875	Canola	mitochondrion, plastid, vacuole	45.62	56.31
CDY19570	Canola	peroxisome	56.2	55.1
Bra031265.1-P	Field mustard	peroxisome	55.84	54.74
AT3G21230.1	Thale cress	peroxisome	56.75	54.56
CDY06431	Canola	peroxisome	54.93	54.43
Bra031263.1-P	Field mustard	peroxisome	54.38	53.89
CDY68920	Canola	peroxisome	54.38	53.89
CDX82208	Canola	peroxisome	56.2	53.85
Bra001819.1-P	Field mustard	peroxisome	55.84	53.31
CDY32416	Canola	peroxisome	55.66	53.14
Bra001820.1-P	Field mustard	peroxisome	56.2	52.65
KRH19011	Soybean	peroxisome	53.47	52.14
CDY06435	Canola	vacuole	37.23	45.84
CDY65966	Canola	peroxisome	26.82	41.64
CDY71190	Canola	peroxisome	28.1	41.62
TraesCS4B01G269200.1	Wheat	peroxisome	40.15	39.64
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	36.5	36.23
TraesCS4B01G075900.1	Wheat	plastid	34.67	34.99
TraesCS2B01G291100.1	Wheat	plastid	37.96	33.6
TraesCS1B01G211300.1	Wheat	peroxisome	35.4	33.05
TraesCS4B01G076100.1	Wheat	peroxisome	32.66	32.97
TraesCS3B01G426300.1	Wheat	peroxisome	33.03	32.21
TraesCS5B01G570100.1	Wheat	peroxisome	32.48	32.13
TraesCS4B01G076000.1	Wheat	peroxisome	32.12	31.94
TraesCS3B01G515400.1	Wheat	peroxisome	31.39	31.27
TraesCS3B01G426200.1	Wheat	peroxisome, plastid	31.57	30.89

Protein Annotations

EnsemblPlants:TraesCS6B01G179900.2	EnsemblPlantsGene:TraesCS6B01G179900	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF149	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
TIGR:cd05904	MapMan:7.8.1.1	MapMan:9.2.1.3	:	:	:

Description

No Description!

Coordinates

chr6B:-:200005329..200010266

Molecular Weight (calculated)

58763.3 Da

IEP (calculated)

5.033

GRAVY (calculated)

0.089

Length

548 amino acids

Sequence
(BLAST)

001: MGSVPEESVA AAPEVVFRSR LPDIEIPNEQ TLQSYCFAKM SEVGSRPCII DGQTGASYTY AEVESLSRKA AAGLRRMGVG KGDVVMNLLR NCPEFAFSFL
101: GAARLGAATT TANPFYTPHE IHRQADAAGA MLIVTEACAV DKVLEYAAGK GLPVVTVDGK RDGCVEFSEL IAGEELPEAE EAGIHPDDVV ALPYSSGTTG
201: LPKGVMLTHR SLITSVAQQV DGENPNLYFS KEDVLLCLLP LFHIYSLNSV LLAGLRAGSA MVIMRKFDIG ALVELVRAHG ITIAPFVPPI VVEIAKSPQV
301: TAGDLASIRM VMSGAAPMGK ELQDAFMAKI PNAVLGQGYG MTEAGPVLAM CLAFAKEPFK VKSGSCGTVV RNAALKIVDP DTGASLGRNQ PGEICIRGEQ
401: IMKGYLNDPE STKNTIDKDG WLHTGDIGLV DDDDEIFIVD RLKEIIKYKG FQVAPAELEA LLITHPEIKD AAVVSLKDDL AGEVPVAFVM RIEGSEITED
501: DIKKFVAKEV VFYKRIHKVF FTDSIPKNPS GKILRKDLRA RLAAGIPS

Best Arabidopsis Sequence Match ( AT3G21240.1 )
(BLAST)

001: MTTQDVIVND QNDQKQCSND VIFRSRLPDI YIPNHLPLHD YIFENISEFA AKPCLINGPT GEVYTYADVH VTSRKLAAGL HNLGVKQHDV VMILLPNSPE
101: VVLTFLAASF IGAITTSANP FFTPAEISKQ AKASAAKLIV TQSRYVDKIK NLQNDGVLIV TTDSDAIPEN CLRFSELTQS EEPRVDSIPE KISPEDVVAL
201: PFSSGTTGLP KGVMLTHKGL VTSVAQQVDG ENPNLYFNRD DVILCVLPMF HIYALNSIML CSLRVGATIL IMPKFEITLL LEQIQRCKVT VAMVVPPIVL
301: AIAKSPETEK YDLSSVRMVK SGAAPLGKEL EDAISAKFPN AKLGQGYGMT EAGPVLAMSL GFAKEPFPVK SGACGTVVRN AEMKILDPDT GDSLPRNKPG
401: EICIRGNQIM KGYLNDPLAT ASTIDKDGWL HTGDVGFIDD DDELFIVDRL KELIKYKGFQ VAPAELESLL IGHPEINDVA VVAMKEEDAG EVPVAFVVRS
501: KDSNISEDEI KQFVSKQVVF YKRINKVFFT DSIPKAPSGK ILRKDLRARL ANGLMN

Arabidopsis Description

4CL2Cinnamyl alcohol dehydrogenase [Source:UniProtKB/TrEMBL;Acc:B1GUZ3]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.