Factsheet for TraesCS4B01G076100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
mitochondrion 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	plastid
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G074700.1	Wheat	peroxisome	92.63	92.12
HORVU4Hr1G012660.1	Barley	peroxisome	89.87	90.2
TraesCS4B01G076000.1	Wheat	peroxisome	85.64	84.39
TraesCS4A01G238800.1	Wheat	plastid	66.67	83.8
TraesCS3B01G515400.1	Wheat	peroxisome	82.87	81.82
TraesCS5B01G570100.1	Wheat	peroxisome	76.8	75.27
Os07t0280200-01	Rice	peroxisome	70.17	68.28
EER98656	Sorghum	peroxisome, plastid	68.88	67.39
Zm00001d019957_P002	Maize	peroxisome	70.17	66.96
CDY45731	Canola	peroxisome	18.42	64.94
GSMUA_Achr1P13470_001	Banana	peroxisome	51.2	53.88
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	50.46	49.82
CDY45730	Canola	vacuole	41.8	49.46
Solyc03g111170.2.1	Tomato	nucleus	50.09	49.28
CDY71478	Canola	vacuole	41.62	49.24
TraesCS4B01G075900.1	Wheat	plastid	49.17	49.17
PGSC0003DMT400039281	Potato	peroxisome	49.91	49.09
TraesCS3B01G426300.1	Wheat	peroxisome	50.64	48.93
VIT_14s0171g00300.t01	Wine grape	peroxisome	47.7	47.7
Bra029229.1-P	Field mustard	peroxisome	48.43	47.05
KRH63739	Soybean	peroxisome, plastid	49.36	46.21
TraesCS3B01G426200.1	Wheat	peroxisome, plastid	47.51	46.07
AT5G63380.1	Thale cress	peroxisome	47.33	45.73
KRH54211	Soybean	peroxisome	49.54	45.06
KRG94318	Soybean	peroxisome, plastid	44.01	44.18
VIT_14s0171g00290.t01	Wine grape	peroxisome	44.01	44.18
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	43.65	43.09
KRH57646	Soybean	peroxisome, plastid	43.28	42.57
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	39.78	39.13
TraesCS4B01G269200.1	Wheat	peroxisome	38.31	37.48
TraesCS1B01G211300.1	Wheat	peroxisome	38.31	35.43
KRH57649	Soybean	plastid	17.31	33.57
TraesCS6B01G179900.2	Wheat	peroxisome	32.97	32.66
TraesCS2B01G171200.1	Wheat	peroxisome	32.04	32.22
KRG94321	Soybean	cytosol, golgi, peroxisome	18.6	32.06
TraesCS6B01G294100.1	Wheat	peroxisome	33.33	31.59
TraesCS2B01G291100.1	Wheat	plastid	35.54	31.18

Protein Annotations

EnsemblPlants:TraesCS4B01G076100.1	EnsemblPlantsGene:TraesCS4B01G076100	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF269	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:72833888..72840122

Molecular Weight (calculated)

57754.2 Da

IEP (calculated)

8.925

GRAVY (calculated)

0.179

Length

543 amino acids

Sequence
(BLAST)

001: MSSAHGGAMD ARSGYCATTK SFRSLRPPLP LPPADVPLTF PAFALSLLPY PLPAHPALLD AATGESVSYP AFLSQVRALA AALRSRALPV GRGDVAFVLA
101: PTRLDVPVLY FALLAVGVAV SPANPALTAG EVSRLVSLSG ASVAFAVSST AAKLPAGLPT VLLDSPHFRS LLNNDQGENE SAPLDAGAVR QSATATIQYS
201: SGTSGRVKAV ALSHRSFIAM GAGLHAQHVK SRKGVERNLM SAPMFHSMGF SSVLNGLAQG LTMVVITAAA ARAGLRGMLE AAERWEVTEI MAAPPLLLGI
301: TKDRCRLKSL VRVVCGGAPL PTSVAEQFRR RFPHVDLRTG YGSTEAGVVS VMVDRDECSH VGSAGRIFHG IEAKIIDIVT GEHLSIGQKG ELCLRSPFIM
401: TGYVGDDEAT AAAFDSESWL KTGDLCYIDQ DGFLFVVDRL KELIKYKAYQ VAPVELELIL QSLPEIVDAA VMPYPHEEAG EIPMALVVRQ PGSKITEAQV
501: MEHVAKQVAP YKKVRKVLFI DSIPRSPAGK ILRRQLSSHL SRL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.