CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 4
peroxisome 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94318	Soybean	peroxisome, plastid	74.82	76.34
KRG94321	Soybean	cytosol, golgi, peroxisome	34.06	59.68
VIT_14s0171g00300.t01	Wine grape	peroxisome	55.98	56.91
KRH57649	Soybean	plastid	27.54	54.29
VIT_14s0171g00290.t01	Wine grape	peroxisome	52.17	53.23
GSMUA_Achr5P25570_001	Banana	peroxisome	50.91	50.91
TraesCS3B01G426300.1	Wheat	peroxisome	50.18	49.29
TraesCS3D01G388100.1	Wheat	peroxisome	49.82	48.93
TraesCS3A01G394300.1	Wheat	peroxisome	49.64	48.93
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	49.46	48.92
EES01913	Sorghum	peroxisome, plastid	48.55	48.29
KRH63739	Soybean	peroxisome, plastid	50.72	48.28
KRH25085	Soybean	peroxisome	26.45	47.87
TraesCS3B01G426200.1	Wheat	peroxisome, plastid	48.19	47.5
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	50.0	47.1
KRH54211	Soybean	peroxisome	50.72	46.9
KRG92118	Soybean	peroxisome	13.59	46.88
TraesCS4A01G239100.2	Wheat	plastid	46.01	46.78
KRH63132	Soybean	vacuole	24.09	46.67
TraesCS4D01G074500.1	Wheat	plastid	45.83	46.59
TraesCS4B01G075900.1	Wheat	plastid	45.11	45.86
EER97853	Sorghum	peroxisome, plastid	45.83	45.75
Os01t0901600-01	Rice	peroxisome, plastid	48.55	44.82
HORVU4Hr1G012660.1	Barley	peroxisome	43.84	44.73
TraesCS4A01G239000.1	Wheat	peroxisome	44.57	44.65
KRH17509	Soybean	peroxisome, plastid	44.38	44.63
Zm00001d018660_P001	Maize	peroxisome	45.11	44.23
GSMUA_Achr1P13470_001	Banana	peroxisome	41.3	44.19
TraesCS4D01G074600.1	Wheat	peroxisome	44.02	44.1
Os07t0280200-01	Rice	peroxisome	44.57	44.09
TraesCS4D01G074700.1	Wheat	peroxisome	43.48	43.96
EER98656	Sorghum	peroxisome, plastid	44.02	43.78
Os01t0901500-01	Rice	plastid	34.96	43.67
HORVU4Hr1G012680.8	Barley	peroxisome	44.02	43.63
HORVU4Hr1G012630.3	Barley	peroxisome	45.29	43.55
TraesCS3B01G515400.1	Wheat	peroxisome	43.3	43.45
TraesCS4B01G076000.1	Wheat	peroxisome	43.3	43.38
TraesCS4B01G076100.1	Wheat	peroxisome	42.57	43.28
TraesCS3A01G472200.1	Wheat	peroxisome	43.12	43.27
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	46.56	43.12
TraesCS3D01G468000.1	Wheat	peroxisome	42.75	42.6
Zm00001d019957_P002	Maize	peroxisome	43.84	42.53
KXG38162	Sorghum	peroxisome	43.3	42.45
OQU88316	Sorghum	peroxisome, plastid	45.83	42.31
TraesCS5B01G570100.1	Wheat	peroxisome	41.85	41.7
TraesCS5D01G561500.1	Wheat	peroxisome	41.85	41.62
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	43.66	41.55
Zm00001d012144_P001	Maize	plastid	30.62	41.22
KRH34672	Soybean	peroxisome	41.49	40.18
KRG92119	Soybean	peroxisome	41.12	39.89
KRH34673	Soybean	peroxisome	40.94	39.65
KRH22842	Soybean	peroxisome, plastid	38.77	39.63
KRH30593	Soybean	peroxisome	39.49	39.07
KRH74284	Soybean	peroxisome	37.14	37.07
TraesCS4A01G238800.1	Wheat	plastid	28.99	37.04
KRH02885	Soybean	peroxisome	35.87	36.94
KRH02884	Soybean	peroxisome	35.51	35.83
KRH09616	Soybean	mitochondrion, peroxisome	34.24	35.13
KRH23700	Soybean	peroxisome	34.78	35.1
KRG98485	Soybean	peroxisome	33.51	33.45
KRH02886	Soybean	peroxisome, plastid	34.06	33.33
KRH29003	Soybean	plastid	34.06	33.33
KRH46374	Soybean	peroxisome	32.79	32.73
KRH77759	Soybean	peroxisome	32.79	32.61
KRH39635	Soybean	cytosol, golgi, peroxisome	28.99	32.13
KRH27719	Soybean	peroxisome	30.43	31.17
KRH19011	Soybean	peroxisome	31.16	30.61

Protein Annotations

EntrezGene:100784234	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	EMBL:ACUP02002873	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:GLYMA_05G075100	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	UniProt:K7KP23	EnsemblPlants:KRH57646
ProteinID:KRH57646	ProteinID:KRH57646.1	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096
PANTHER:PTHR24096:SF160	SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI0002956A72	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:-:9240559..9258311

Molecular Weight (calculated)

60525.4 Da

IEP (calculated)

9.378

GRAVY (calculated)

0.017

Length

552 amino acids

Sequence
(BLAST)

001: MEQRKSIWSP VTDPRSGFNR ESRTFHSLKP PLRLPPPNAA VSAAAFALFL RRNSQFPDSS TAFIDSATGH RLSYGELLHR AKTLASNLAT ILKLTKGDTA
101: LVLSPNILQV PILCFALLSL GVVVSPANPL STRSELTRFF NISNPSIVFT VTSVVEKTRE FQVKTVLLDS PEFDTLTKSQ IHTKYIQECD SHQRGLVSNM
201: QVTQSDVAAI LYSSGTTGTI KGVMLTHRNL TAIAAGYDTV REKRKEPAVV LYTVPFFHVY GFTFSLGAMV LSETVVIMER FSMKAMLSAV ERFRVTHATM
301: VPALVVAMTK DCVIAGYDLT SLEGIVCGGS PLRKETDEAF KAKFPNVLVM QGYGLTESAV TRTTPEEANQ VGATGKLIPN IEAKIVNPET GEAMFPGEQG
401: ELWIRGPYVM KGYSGDPKAT SATLVDGWLR TGDLCYFDSK GFLYVVDRLK ELIKYKGYQV APAELEELLL SHSEINDAAV IPYPDEVAGQ VPMAFVVRQP
501: QSSLGAAEVI DFVAKQVSPY KKIRRVAFVN SIPKNAAGKI LRKDLKLALS RL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.