Factsheet for TraesCS3A01G472200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
mitochondrion 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	plastid
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G515400.1	Wheat	peroxisome	93.27	93.27
TraesCS3D01G468000.1	Wheat	peroxisome	92.55	91.88
TraesCS4A01G239000.1	Wheat	peroxisome	87.09	86.93
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	87.27	82.76
TraesCS4A01G238800.1	Wheat	plastid	57.27	72.92
Os07t0280200-01	Rice	peroxisome	72.55	71.51
Zm00001d019957_P002	Maize	peroxisome	73.27	70.83
EER98656	Sorghum	peroxisome, plastid	71.09	70.45
CDY45731	Canola	peroxisome	17.45	62.34
GSMUA_Achr1P13470_001	Banana	peroxisome	52.73	56.2
TraesCS4A01G239100.2	Wheat	plastid	50.36	51.01
TraesCS3A01G394300.1	Wheat	peroxisome	50.91	50.0
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	49.27	49.27
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	49.64	48.92
PGSC0003DMT400039281	Potato	peroxisome	48.73	48.55
CDY71478	Canola	vacuole	40.36	48.37
CDY45730	Canola	vacuole	40.18	48.15
Solyc03g111170.2.1	Tomato	nucleus	48.18	48.01
VIT_14s0171g00300.t01	Wine grape	peroxisome	46.0	46.59
KRH63739	Soybean	peroxisome, plastid	49.09	46.55
Bra029229.1-P	Field mustard	peroxisome	46.73	45.98
VIT_14s0171g00290.t01	Wine grape	peroxisome	45.09	45.84
KRH54211	Soybean	peroxisome	48.73	44.89
AT5G63380.1	Thale cress	peroxisome	45.64	44.66
KRG94318	Soybean	peroxisome, plastid	43.27	43.99
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	43.64	43.64
KRH57646	Soybean	peroxisome, plastid	43.27	43.12
TraesCS5A01G498800.1	Wheat	peroxisome	40.73	40.58
TraesCS4A01G036200.1	Wheat	peroxisome	39.09	39.16
TraesCS1A01G196700.1	Wheat	peroxisome	38.0	36.8
TraesCS6A01G151700.1	Wheat	peroxisome	31.82	32.05
TraesCS2A01G145800.1	Wheat	peroxisome	31.45	31.92
KRH57649	Soybean	plastid	16.18	31.79
TraesCS2A01G272900.1	Wheat	plastid	35.64	31.61
TraesCS6A01G266700.1	Wheat	peroxisome	32.73	31.41
TraesCS7A01G496200.1	Wheat	peroxisome	31.64	31.24
KRG94321	Soybean	cytosol, golgi, peroxisome	17.09	29.84

Protein Annotations

EnsemblPlants:TraesCS3A01G472200.1	EnsemblPlantsGene:TraesCS3A01G472200	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF269	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
TIGR:cd05904	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:703343803..703347043

Molecular Weight (calculated)

58407.1 Da

IEP (calculated)

8.617

GRAVY (calculated)

0.177

Length

550 amino acids

Sequence
(BLAST)

001: MSSSGHGAVD ARTGYCAATK SFLSLRGPLP LPPADVPLTF PAFALSLLPS PLPAHPALLD AATGEAVSYP AFLSQVRALV GALRSRVVPL GRGDVAFVLA
101: PARLDVPVLY FALLAVGAVV SPANPALTAG EVSRLVCLSG ASFAFAVSST AGKLPAGLPT TLLDSPHFRS LLHSDHGENQ SAPLDAGAVC QSATATVLYS
201: SGTTGRVKAA AVPHRSFIVR AAGLRALHLQ GKSRKANERT LIGAPMFHTM GFFFTLNGLA QGITTVVMTE AAARAGLRGM LEAAQRWEVT EIMAAPPVVL
301: GMTKERCRLT SLLRVICGGA PLPRSAAEQF PRRFPQVDLC MGYGATEAGG ISLMIDRDEC SRIGSSGRIS HNVEAKIVDI VTGEPLSIGQ KGELWVRGPS
401: IMTGYLGDDE ANAASFDSEG WLKTGDLCYI DQDGFLFVVD RLKELIKYKA YQVAPAELEL VLQSLPEIVD AAVMPYPHEE AGEIPMALVV RQPGSKVTEA
501: QVMEHVAKQV TPYKKVRKVL FVDSIPRSPA GKILRRQLKD HMQSCIVSRL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.