Factsheet for TraesCS2A01G145800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G171200.1	Wheat	peroxisome	96.86	97.22
TraesCS2D01G150400.1	Wheat	peroxisome	96.49	96.85
Os08t0448000-01	Rice	peroxisome	85.61	86.09
EES15085	Sorghum	peroxisome	84.5	82.97
Zm00001d032103_P001	Maize	peroxisome	84.32	82.34
GSMUA_Achr9P22840_001	Banana	peroxisome	48.71	69.11
GSMUA_Achr4P12590_001	Banana	peroxisome	62.18	68.92
GSMUA_Achr4P05820_001	Banana	peroxisome	65.13	67.62
GSMUA_Achr1P23450_001	Banana	peroxisome	64.58	67.31
GSMUA_AchrUn_...	Banana	peroxisome	64.02	66.99
CDY53918	Canola	peroxisome	22.88	66.31
GSMUA_Achr7P05070_001	Banana	peroxisome	60.15	66.13
CDY32418	Canola	peroxisome	21.96	65.03
TraesCS6A01G151700.1	Wheat	peroxisome	64.21	63.74
PGSC0003DMT400074444	Potato	peroxisome	63.28	63.17
VIT_11s0052g01090.t01	Wine grape	peroxisome	63.84	63.14
TraesCS7A01G496200.1	Wheat	peroxisome	64.58	62.84
Solyc06g068650.2.1	Tomato	peroxisome	62.55	62.43
CDY43921	Canola	peroxisome	63.28	62.25
PGSC0003DMT400036886	Potato	peroxisome	62.55	62.2
Solyc03g117870.2.1	Tomato	plastid	62.55	62.2
CDY19568	Canola	peroxisome	63.28	62.14
Bra031266.1-P	Field mustard	peroxisome	63.28	62.14
CDX87831	Canola	peroxisome	63.1	62.07
Bra030429.1-P	Field mustard	peroxisome	63.1	61.96
AT3G21240.1	Thale cress	peroxisome	63.28	61.69
AT1G51680.1	Thale cress	peroxisome	63.84	61.68
VIT_11s0052g01110.t01	Wine grape	peroxisome	61.25	61.6
KRH02885	Soybean	peroxisome	60.89	61.57
KRH02884	Soybean	peroxisome	61.62	61.06
KRH09616	Soybean	mitochondrion, peroxisome	59.96	60.41
KRH23700	Soybean	peroxisome	60.33	59.78
PGSC0003DMT400051216	Potato	peroxisome	62.36	59.19
Solyc07g008360.1.1	Tomato	peroxisome	61.99	59.15
TraesCS6A01G266700.1	Wheat	peroxisome	61.44	58.12
PGSC0003DMT400037485	Potato	peroxisome	58.67	58.03
Solyc12g042460.1.1	Tomato	peroxisome	58.49	57.85
KRH02886	Soybean	peroxisome, plastid	59.04	56.74
CDY68920	Canola	peroxisome	57.56	56.42
CDY06431	Canola	peroxisome	57.38	56.24
Bra031263.1-P	Field mustard	peroxisome	57.38	56.24
AT3G21230.1	Thale cress	peroxisome	58.3	55.44
Bra031265.1-P	Field mustard	peroxisome	57.01	55.28
CDY48875	Canola	mitochondrion, plastid, vacuole	45.2	55.18
CDY19570	Canola	peroxisome	56.83	55.1
CDX82208	Canola	peroxisome	57.38	54.37
CDY32416	Canola	peroxisome	57.2	54.01
Bra001819.1-P	Field mustard	peroxisome	57.2	54.01
Bra001820.1-P	Field mustard	peroxisome	56.83	52.65
KRH19011	Soybean	peroxisome	54.06	52.14
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	52.21	51.83
CDY71190	Canola	peroxisome	31.0	45.41
CDY65966	Canola	peroxisome	29.34	45.04
CDY06435	Canola	vacuole	36.53	44.49
TraesCS4A01G036200.1	Wheat	peroxisome	42.62	42.08
TraesCS5A01G498800.1	Wheat	peroxisome	38.01	37.32
TraesCS4A01G239100.2	Wheat	plastid	35.24	35.17
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	35.98	34.95
TraesCS3A01G394300.1	Wheat	peroxisome	35.98	34.82
TraesCS1A01G196700.1	Wheat	peroxisome	36.35	34.68
TraesCS2A01G272900.1	Wheat	plastid	38.56	33.71
TraesCS3A01G472200.1	Wheat	peroxisome	31.92	31.45
TraesCS4A01G239000.1	Wheat	peroxisome	31.92	31.4
TraesCS4A01G238800.1	Wheat	plastid	20.11	25.23

Protein Annotations

EnsemblPlants:TraesCS2A01G145800.1	EnsemblPlantsGene:TraesCS2A01G145800	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF244	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
TIGR:cd05904	MapMan:7.8.1.1	MapMan:9.2.1.3	:	:	:

Description

No Description!

Coordinates

chr2A:-:90595247..90597087

Molecular Weight (calculated)

57766.3 Da

IEP (calculated)

5.894

GRAVY (calculated)

0.173

Length

542 amino acids

Sequence
(BLAST)

001: MGSLPEQQQQ QVVFRSTLPD IVIPDHLPLH DYVFERLAER RDRACLIDGA TGETLTVGDV HRLSRRVAAG LYSLGVRNGS TVMLLLPNCV EFALAFLAAS
101: RLGAATTTAN PLHTPPEIAK QAAASRATLV VTEPAFVAKV RGLAGVVIVA TGDGAEGCAS FSDLAAADDS ALHEAPIDVA SDVVALPYSS GTTGLPKGVM
201: LSHRGLVTSV AQLVDGDNPN LHLREDDVVL CVLPMFHVYS LHSILLCGLR AGAALVVMKR FDTVKMMQLV ERHGITIAPL VPPIVVEMAK GDAMDRHDLS
301: SVRMVISGAA PMGKELQDII HAKLPNAVLG QGYGMTEAGP VLSMCMAFAK EPSPVKSGAC GTVVRNAELK IVDPETGVCL GRNQPGEICI RGRQIMKGYL
401: DNPEATAETV DKEGWLHTGD VGFVDADDEI FIVDRLKELI KYKGFQVAPA ELEAMLIAHP GIADAAVVPM KDDASGEVPV AFVVPSSDSA DMTEDEIKQY
501: VAKQVVFYKR LQKVFFVSTI PKAPSGKILR KDLRAKLAVG SC

Best Arabidopsis Sequence Match ( AT3G21240.1 )
(BLAST)

001: MTTQDVIVND QNDQKQCSND VIFRSRLPDI YIPNHLPLHD YIFENISEFA AKPCLINGPT GEVYTYADVH VTSRKLAAGL HNLGVKQHDV VMILLPNSPE
101: VVLTFLAASF IGAITTSANP FFTPAEISKQ AKASAAKLIV TQSRYVDKIK NLQNDGVLIV TTDSDAIPEN CLRFSELTQS EEPRVDSIPE KISPEDVVAL
201: PFSSGTTGLP KGVMLTHKGL VTSVAQQVDG ENPNLYFNRD DVILCVLPMF HIYALNSIML CSLRVGATIL IMPKFEITLL LEQIQRCKVT VAMVVPPIVL
301: AIAKSPETEK YDLSSVRMVK SGAAPLGKEL EDAISAKFPN AKLGQGYGMT EAGPVLAMSL GFAKEPFPVK SGACGTVVRN AEMKILDPDT GDSLPRNKPG
401: EICIRGNQIM KGYLNDPLAT ASTIDKDGWL HTGDVGFIDD DDELFIVDRL KELIKYKGFQ VAPAELESLL IGHPEINDVA VVAMKEEDAG EVPVAFVVRS
501: KDSNISEDEI KQFVSKQVVF YKRINKVFFT DSIPKAPSGK ILRKDLRARL ANGLMN

Arabidopsis Description

4CL2Cinnamyl alcohol dehydrogenase [Source:UniProtKB/TrEMBL;Acc:B1GUZ3]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.