CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
extracellular 1
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032103_P001	Maize	peroxisome	94.02	93.51
TraesCS2B01G171200.1	Wheat	peroxisome	83.7	85.56
TraesCS2D01G150400.1	Wheat	peroxisome	83.33	85.19
TraesCS2A01G145800.1	Wheat	peroxisome	82.97	84.5
Os08t0448000-01	Rice	peroxisome	82.43	84.42
GSMUA_Achr9P22840_001	Banana	peroxisome	48.37	69.9
GSMUA_Achr4P12590_001	Banana	peroxisome	61.78	69.73
GSMUA_Achr4P05820_001	Banana	peroxisome	65.22	68.97
CDY53918	Canola	peroxisome	23.19	68.45
CDY32418	Canola	peroxisome	22.28	67.21
GSMUA_AchrUn_...	Banana	peroxisome	62.86	66.99
GSMUA_Achr7P05070_001	Banana	peroxisome	59.78	66.94
GSMUA_Achr1P23450_001	Banana	peroxisome	63.04	66.92
EER90150	Sorghum	peroxisome	64.67	64.09
Solyc03g117870.2.1	Tomato	plastid	62.5	63.3
EES04623	Sorghum	peroxisome	63.41	63.06
PGSC0003DMT400074444	Potato	peroxisome	61.96	62.98
PGSC0003DMT400036886	Potato	peroxisome	62.14	62.94
VIT_11s0052g01090.t01	Wine grape	peroxisome	62.32	62.77
KRH02885	Soybean	peroxisome	60.33	62.13
CDY43921	Canola	peroxisome	61.59	61.71
Solyc06g068650.2.1	Tomato	peroxisome	60.69	61.69
KRH02884	Soybean	peroxisome	61.05	61.61
CDX87831	Canola	peroxisome	61.41	61.52
Bra030429.1-P	Field mustard	peroxisome	61.41	61.41
AT1G51680.1	Thale cress	peroxisome	62.32	61.32
VIT_11s0052g01110.t01	Wine grape	peroxisome	59.78	61.22
CDY19568	Canola	peroxisome	61.05	61.05
Bra031266.1-P	Field mustard	peroxisome	60.87	60.87
EES13602	Sorghum	peroxisome	62.86	60.77
KRH09616	Soybean	mitochondrion, peroxisome	58.7	60.22
AT3G21240.1	Thale cress	peroxisome	60.33	59.89
KRH23700	Soybean	peroxisome	58.88	59.41
EES05680	Sorghum	peroxisome	60.33	58.83
PGSC0003DMT400037485	Potato	peroxisome	57.61	58.03
PGSC0003DMT400051216	Potato	peroxisome	59.96	57.97
Solyc07g008360.1.1	Tomato	peroxisome	59.6	57.92
Solyc12g042460.1.1	Tomato	peroxisome	57.07	57.48
AT3G21230.1	Thale cress	peroxisome	59.06	57.19
CDY68920	Canola	peroxisome	57.25	57.14
CDY48875	Canola	mitochondrion, plastid, vacuole	45.83	56.98
Bra031263.1-P	Field mustard	peroxisome	57.07	56.96
CDY06431	Canola	peroxisome	56.88	56.78
KRH02886	Soybean	peroxisome, plastid	57.79	56.56
CDX82208	Canola	peroxisome	58.15	56.12
Bra031265.1-P	Field mustard	peroxisome	56.7	55.99
CDY19570	Canola	peroxisome	56.7	55.99
Bra001819.1-P	Field mustard	peroxisome	57.97	55.75
CDY32416	Canola	peroxisome	57.97	55.75
Bra001820.1-P	Field mustard	peroxisome	56.88	53.68
KRH19011	Soybean	peroxisome	53.8	52.85
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	45.65	46.15
CDY71190	Canola	peroxisome	30.8	45.95
CDY65966	Canola	peroxisome	28.8	45.04
CDY06435	Canola	vacuole	35.69	44.27
OQU91476	Sorghum	peroxisome	40.76	40.4
KXG40154	Sorghum	peroxisome	39.67	39.6
EER95569	Sorghum	peroxisome	37.14	37.07
KXG38810	Sorghum	peroxisome	36.41	35.08
EER99996	Sorghum	plastid	38.04	34.71
EES01913	Sorghum	peroxisome, plastid	34.78	34.59
EER97853	Sorghum	peroxisome, plastid	33.88	33.82
EER98656	Sorghum	peroxisome, plastid	32.25	32.07
OQU88316	Sorghum	peroxisome, plastid	34.24	31.61
KXG38162	Sorghum	peroxisome	31.7	31.08
KXG26308	Sorghum	peroxisome	22.28	22.57

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:7.8.1.1	EntrezGene:8077870	MapMan:9.2.1.3	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	UniProt:C5YLR0	EnsemblPlants:EES15085	ProteinID:EES15085	ProteinID:EES15085.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF244	EnsemblPlantsGene:SORBI_3007G145600	SUPFAM:SSF56801	UniParc:UPI0001A87C05
RefSeq:XP_002445590.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:57553940..57556333

Molecular Weight (calculated)

58803.5 Da

IEP (calculated)

5.647

GRAVY (calculated)

0.139

Length

552 amino acids

Sequence
(BLAST)

001: MVSPTTAEPK AETTTVFRST LPDIAIPDHL PLHDYVLERL AERRDRACLI DGATGETLTF GDVDRVSRRV AAGMRAALGV RSGGTVMLLL PNCVEFALAF
101: LACSRLGAAA TTANPLHTPP EIAKQAAASG ATVVITEPAF VGKVRGLAGV AVVATGDGAE GCVSFSELTD AADDDDGSAL PPIDVANDVV ALPYSSGTTG
201: LPKGVMLSHR GLVTSVAQLV DGDNPNLHLR EDDVVLCVLP MFHVYSLHSI LLCGMRAGAA LVIMKRFDTL RMFELVKRHG ITVVPLVLPI AVEMAKSDAM
301: DRHDLSSVRM VISGAAPMGR ELQDLLRAKL PGAVLGQGYG MTEAGPVLSM CMAFAKEPLP VKSGACGTVV RNAELKIVDP DTGLSLRRNQ PGEICIRGKQ
401: LMKGYLNNPE ATAKTIDDEG WLHTGDIGYV DDDDEIFIVD RLKELIKYKG FQVAPAELEA MLIAHPSIAD AAVVPMKDDS CGEIPVAFVV TSGGYEMTED
501: EIKQYVAKQV VFYKRLHKVF FVEAIPKAPS GKILRKDLRA KLASGFSNGS SC

Best Arabidopsis Sequence Match ( AT1G51680.1 )
(BLAST)

001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L

Arabidopsis Description

4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.